Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G526100.1 | Wheat | nucleus | 97.47 | 97.62 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 97.24 | 97.31 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 88.18 | 87.38 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 80.81 | 86.1 |
| Os08t0564800-01 | Rice | extracellular | 78.97 | 77.95 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 23.94 | 77.23 |
| EES14038 | Sorghum | nucleus | 76.98 | 76.33 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 35.38 | 75.82 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 21.57 | 75.74 |
| Zm00001d049894_P011 | Maize | nucleus | 73.83 | 73.55 |
| Zm00001d031863_P013 | Maize | nucleus | 73.52 | 73.24 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 6.6 | 68.8 |
| PGSC0003DMT400082469 | Potato | extracellular | 4.76 | 62.63 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 4.22 | 57.29 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 3.38 | 55.0 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 54.11 | 52.26 |
| GSMUA_Achr11P... | Banana | nucleus | 51.04 | 52.08 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 8.75 | 50.67 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 8.6 | 48.28 |
| CDX81731 | Canola | plastid | 30.78 | 47.62 |
| OQU80675 | Sorghum | nucleus | 15.43 | 47.29 |
| KXG25352 | Sorghum | nucleus | 5.22 | 43.59 |
| CDY19981 | Canola | cytosol | 5.53 | 41.14 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 2.84 | 40.66 |
| CDY52868 | Canola | cytosol | 4.07 | 37.59 |
| Bra026748.1-P | Field mustard | cytosol | 4.07 | 37.59 |
| KRH08040 | Soybean | cytosol | 2.84 | 35.92 |
| KRH45070 | Soybean | cytosol | 2.84 | 35.92 |
| CDY33382 | Canola | nucleus | 9.67 | 35.2 |
| AT1G15770.1 | Thale cress | cytosol | 7.83 | 34.81 |
| KRH52764 | Soybean | nucleus | 6.06 | 32.38 |
| CDY19982 | Canola | nucleus | 15.04 | 31.72 |
| Bra036204.1-P | Field mustard | nucleus | 15.04 | 31.72 |
| CDY35787 | Canola | nucleus | 20.8 | 30.45 |
| CDX85281 | Canola | nucleus | 20.87 | 29.5 |
| CDY66823 | Canola | cytosol, nucleus | 20.18 | 29.29 |
| Bra040585.1-P | Field mustard | nucleus | 20.18 | 29.25 |
| Bra025408.1-P | Field mustard | nucleus | 23.18 | 28.65 |
| CDY00085 | Canola | nucleus | 18.34 | 27.79 |
| CDX86356 | Canola | nucleus | 19.8 | 27.33 |
| KRH20610 | Soybean | cytosol | 14.66 | 27.21 |
| AT2G10440.1 | Thale cress | nucleus | 18.8 | 26.2 |
| CDY33381 | Canola | cytosol, extracellular | 6.22 | 25.08 |
| CDY19980 | Canola | nucleus | 10.97 | 24.11 |
| CDY36590 | Canola | cytosol | 5.22 | 23.21 |
| Bra026105.1-P | Field mustard | cytosol | 8.6 | 10.64 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G460900.1 | EnsemblPlantsGene:TraesCS7B01G460900 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil | PFAM:PF16987 |
| SEG:seg | MapMan:15.3.3.3.5 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:718356279..718367286
Molecular Weight (calculated)
143295.0 Da
IEP (calculated)
9.858
GRAVY (calculated)
-0.807
Length
1303 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDANWRPTQG SDPAAGVGGV DPGAPPPPAG GDWRAGLQPD ARARIVSKIT ETLKKHLPAS APDGVNELQK IAVRFEEKIY TAATNQSDYL RKISLKMLSM
0101: ETKTQQAAGS AQVIPNQNNS TPGLPSEGSN QAQPSAIPLM SQQQARQPNT TSVQASSLTN IGQNLPGVNQ TSTMQNVSVM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYQQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSTQQSMMQ MSSGLHPVQS TVPQTQPMSR QSVTQSGIQQ NQLNSVQQSV
0301: PSLLQQPQQS VGRQQQQAQP SMHQQPSLQR QQPNIPLQQQ QQQQQQQLMG QQPNLERNQL IGQQNGAVEM QQQQRLPAQS NNLLNVQQTQ QQMLNQQSMP
0401: LHQPQQLGSQ TNMSSLQQQQ QNQQQQRMHM LQMKAQQTQQ QQHAQQPPMG LMQPQSQHNQ LQQSQQHLMS QFQSQPNQLQ QQLGMQQQPS MQQRLQTSGG
0501: MLLQQNNMGQ QKQFIQAQRG LQEVSSSTSA DSTTQTGLAG AGDWQEEIYQ MIKNLKDQYF AELSDLSNKI SMKLQHVDSI IPPQKPSEQY DRMKNFKTML
0601: DRILQLLQIS KSTIQPAMRD KVPQYEKQII SILNSQRRKP VQPQIQQQFQ PPAGQAPNSS ILQQQQTSQN LQQHDSHTNP QASLSSMSTG LQSSGVAGIQ
0701: HVPVPPTTNF SAPTQQNGAN MQHQAVSNLE AAQGGNLNSL QHGSASGALQ QGNAGPMQGT MNTQLQTSSS MLSHNSMSTM QPNGNSMQAN ASSLQQLKQQ
0801: QQDHHMMQSQ QMKRQMFQQY QQKQQMLQQQ FPIQQQLQKQ QQVQMQVPQL HAGNDVNESK ARQGTAVKSG IYQQHLGQRS NYYNQQLKQG VPFPISSPQN
0901: LQASSPQISH HSPQVDQHNL LPSQVKTGTP LNSANSPYVP SPSPSVAPSP IPVDSDKQHS NISSLTNTGQ TGHQQTSLAP QTQSIAVNTP GISASPLLAE
1001: FTSGDGSQAN MPTQVPTKSN AAERPMDRLL KALRTTQRES LNAAVSDIRS VVSMMDRIAG SAPGNGSRTA VGEDLVAMTK CRLQARNFIT NDGSGASKKM
1101: KRDISAMPLN VSSAGSVDDS FKQTFGVDTP DLQSTATSRA KRRKTEVNHA LLEEIEEINQ GLIDTELRVC EDDDESLAAT SEGTVIKCTY TAVAVSPSLK
1201: SMLASAQTSP IMPLRLLVPA GYPKCSPVLL DKFLDEQRNS DDLSSKAKSK FGVLLRGLDE PMSLREIART WDACARGAIA EYAQKSGGGS FSSSYGRWET
1301: CVV
0101: ETKTQQAAGS AQVIPNQNNS TPGLPSEGSN QAQPSAIPLM SQQQARQPNT TSVQASSLTN IGQNLPGVNQ TSTMQNVSVM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYQQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSTQQSMMQ MSSGLHPVQS TVPQTQPMSR QSVTQSGIQQ NQLNSVQQSV
0301: PSLLQQPQQS VGRQQQQAQP SMHQQPSLQR QQPNIPLQQQ QQQQQQQLMG QQPNLERNQL IGQQNGAVEM QQQQRLPAQS NNLLNVQQTQ QQMLNQQSMP
0401: LHQPQQLGSQ TNMSSLQQQQ QNQQQQRMHM LQMKAQQTQQ QQHAQQPPMG LMQPQSQHNQ LQQSQQHLMS QFQSQPNQLQ QQLGMQQQPS MQQRLQTSGG
0501: MLLQQNNMGQ QKQFIQAQRG LQEVSSSTSA DSTTQTGLAG AGDWQEEIYQ MIKNLKDQYF AELSDLSNKI SMKLQHVDSI IPPQKPSEQY DRMKNFKTML
0601: DRILQLLQIS KSTIQPAMRD KVPQYEKQII SILNSQRRKP VQPQIQQQFQ PPAGQAPNSS ILQQQQTSQN LQQHDSHTNP QASLSSMSTG LQSSGVAGIQ
0701: HVPVPPTTNF SAPTQQNGAN MQHQAVSNLE AAQGGNLNSL QHGSASGALQ QGNAGPMQGT MNTQLQTSSS MLSHNSMSTM QPNGNSMQAN ASSLQQLKQQ
0801: QQDHHMMQSQ QMKRQMFQQY QQKQQMLQQQ FPIQQQLQKQ QQVQMQVPQL HAGNDVNESK ARQGTAVKSG IYQQHLGQRS NYYNQQLKQG VPFPISSPQN
0901: LQASSPQISH HSPQVDQHNL LPSQVKTGTP LNSANSPYVP SPSPSVAPSP IPVDSDKQHS NISSLTNTGQ TGHQQTSLAP QTQSIAVNTP GISASPLLAE
1001: FTSGDGSQAN MPTQVPTKSN AAERPMDRLL KALRTTQRES LNAAVSDIRS VVSMMDRIAG SAPGNGSRTA VGEDLVAMTK CRLQARNFIT NDGSGASKKM
1101: KRDISAMPLN VSSAGSVDDS FKQTFGVDTP DLQSTATSRA KRRKTEVNHA LLEEIEEINQ GLIDTELRVC EDDDESLAAT SEGTVIKCTY TAVAVSPSLK
1201: SMLASAQTSP IMPLRLLVPA GYPKCSPVLL DKFLDEQRNS DDLSSKAKSK FGVLLRGLDE PMSLREIART WDACARGAIA EYAQKSGGGS FSSSYGRWET
1301: CVV
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.