Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082469 | Potato | extracellular | 7.83 | 55.56 |
| KRH08039 | Soybean | cytosol | 3.99 | 33.33 |
| KRH45070 | Soybean | cytosol | 4.56 | 31.07 |
| KRH08040 | Soybean | cytosol | 4.56 | 31.07 |
| TraesCS1A01G346100.1 | Wheat | nucleus | 3.7 | 21.31 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 3.7 | 20.8 |
| KXG25352 | Sorghum | nucleus | 4.56 | 20.51 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 7.12 | 20.0 |
| KRH45069 | Soybean | nucleus | 4.7 | 19.76 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 3.42 | 19.51 |
| AT1G15770.1 | Thale cress | cytosol | 8.12 | 19.45 |
| KRH52764 | Soybean | nucleus | 6.55 | 18.85 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 5.41 | 16.89 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 5.56 | 16.88 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 5.41 | 16.38 |
| TraesCSU01G036900.1 | Wheat | cytosol | 5.27 | 16.3 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 5.27 | 15.95 |
| KRH44505 | Soybean | nucleus | 29.49 | 15.87 |
| KRH23611 | Soybean | nucleus | 28.77 | 15.26 |
| KRH09691 | Soybean | nucleus | 29.06 | 15.16 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 26.21 | 15.04 |
| GSMUA_Achr8P09800_001 | Banana | nucleus | 2.99 | 15.0 |
| CDY33382 | Canola | nucleus | 7.55 | 14.8 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 27.64 | 14.75 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 27.49 | 14.7 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 7.55 | 14.68 |
| TraesCS7D01G526100.1 | Wheat | nucleus | 27.21 | 14.68 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 27.21 | 14.66 |
| TraesCS7A01G283500.3 | Wheat | nucleus | 27.21 | 14.61 |
| EES14038 | Sorghum | nucleus | 27.35 | 14.61 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 1.99 | 14.58 |
| HORVU7Hr1G060970.1 | Barley | nucleus | 27.21 | 14.55 |
| Zm00001d031863_P013 | Maize | nucleus | 27.07 | 14.53 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 26.92 | 14.52 |
| Zm00001d049894_P011 | Maize | nucleus | 26.78 | 14.37 |
| Os08t0564800-01 | Rice | extracellular | 26.92 | 14.32 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 8.69 | 14.22 |
| OQU80675 | Sorghum | nucleus | 7.98 | 13.18 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 7.41 | 12.87 |
| TraesCS4A01G315600.1 | Wheat | nucleus | 8.4 | 12.22 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 9.69 | 11.18 |
| TraesCS1A01G403500.2 | Wheat | nucleus | 9.54 | 11.09 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 5.84 | 11.05 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 9.26 | 10.69 |
| KRH47405 | Soybean | nucleus | 16.1 | 10.64 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 6.98 | 8.81 |
Protein Annotations
| EMBL:ACUP02008281 | EnsemblPlants:KRH20610 | EnsemblPlantsGene:GLYMA_13G189300 | EntrezGene:102666283 | Gene3D:1.10.246.20 | ncoils:Coil |
| PANTHER:PTHR33137 | ProteinID:KRH20610 | ProteinID:KRH20610.1 | SEG:seg | UniParc:UPI000295C28A | UniProt:K7M0K0 |
| MapMan:15.3.3.3.5 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:30273050..30283908
Molecular Weight (calculated)
78254.6 Da
IEP (calculated)
8.087
GRAVY (calculated)
-0.487
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTNKTKPTE QQTMTVKWKF PEYRKAVVKK CVEGVIKQSG LPLARLNGLV QFLERFEAKV NAAAKNEVEY LKSLSEKVKE ISSQLKTAES KPRPSNSTGS
101: VEVCSAQEAG KSANTEWKEQ VYQRVQRMNS AYFPTVNTIY QQMNRKLQQL ESSPQEPNTV ERMRFNMKLL EQILAILRVN KWQITTEFKE NLDKAEKFIQ
201: SKFFSKNVSS HHQGQQRSAD VQSRQQSGPS HSSISPLMIL EMKPSPQALG SQNYHPMKDV SQQNKMCLQE KQAAKQYGGS QQSGPSHSSI SPVKTLEMRP
301: SPQALGTQNY HMMKDVSQQN KMCLQEKQVT IKYRNLQQDV NQLSIIKGAG NTVQQQTQGT QKATEAFSVS VNSQGISASP LIENCNNLKE ISRKPTLTSD
401: EPSAAMQYFL KVLTSISPEA LSASLGEIRE VVYLNDAIPS PELMHGPPEM VQQQMQPCLI SQTGINLASD IEPCSQARYI TCNDFVPTGR KRSCSMNSMT
501: AFDTSSTCAS SCDSNQLTDT EKPDLTLVTS KHPRIVEKCS LLEEIKEINN LLIDSEIVIG EKDSIQSAAG GAAEDGEGLV IKFLFNAVTF NQNLISHLSA
601: DKKSIIKPLW LLVPASYPFC PPVVLDKMPL EVSDGMEDLS TIAKSKLRQF LQCLNQPWSL GDIAMLWERC AREAILEYAK CIGGGTFSSI YGGWNMCQNY
701: DA
101: VEVCSAQEAG KSANTEWKEQ VYQRVQRMNS AYFPTVNTIY QQMNRKLQQL ESSPQEPNTV ERMRFNMKLL EQILAILRVN KWQITTEFKE NLDKAEKFIQ
201: SKFFSKNVSS HHQGQQRSAD VQSRQQSGPS HSSISPLMIL EMKPSPQALG SQNYHPMKDV SQQNKMCLQE KQAAKQYGGS QQSGPSHSSI SPVKTLEMRP
301: SPQALGTQNY HMMKDVSQQN KMCLQEKQVT IKYRNLQQDV NQLSIIKGAG NTVQQQTQGT QKATEAFSVS VNSQGISASP LIENCNNLKE ISRKPTLTSD
401: EPSAAMQYFL KVLTSISPEA LSASLGEIRE VVYLNDAIPS PELMHGPPEM VQQQMQPCLI SQTGINLASD IEPCSQARYI TCNDFVPTGR KRSCSMNSMT
501: AFDTSSTCAS SCDSNQLTDT EKPDLTLVTS KHPRIVEKCS LLEEIKEINN LLIDSEIVIG EKDSIQSAAG GAAEDGEGLV IKFLFNAVTF NQNLISHLSA
601: DKKSIIKPLW LLVPASYPFC PPVVLDKMPL EVSDGMEDLS TIAKSKLRQF LQCLNQPWSL GDIAMLWERC AREAILEYAK CIGGGTFSSI YGGWNMCQNY
701: DA
001: MEGNTNWKPN EQGGNRDAAN NRIDWRSQHE PELRQKVLSK IVCSLNDYRK VEKFKEKFHA HEEYKINDIA SKFEENFYSI ATDKNDYLRK LSETLHYIQR
101: TYTRVLASQV VVNQAQSLPA LLPYMQTTTS QQWLQQNTQS NLCVICFAKS GPYNRSRFSK TDTCSVTAAA TSSAKFVETT YSTAFSSIKL TKHSITDQKS
201: VFDTTVLIMN IIVASQDSTG KTVNVNAGNW QEETYQKIKK LKEMCLPVLS LMHQRVAEKL RETESLPPQP MQAQWIEKLK AGKLSMEHLM FFLNVHRSSV
301: SEKHRDKFSQ YEYHILKFTK SQTMVLRPTQ QQQGQFPPSQ TAMQTQSPQV HVSQSLYKEQ RRSRLMPSSQ NEASSLLQIR PKLDPRDENI IMASSGNVML
401: PSVKQNPRAV NTNISSVQSL QKQKRFHHRQ MQQQQPQQGN HQHQMQTNEM NDVRMRERVN IKARLLEQQV SSSQRQVPKQ ESNVSSSQIQ NHSSPQLVDQ
501: HILPATINKT GTPLNSSGSA FVAPAPSPVP GDSEMPISVE SPVSGVDEIN STLDSSSKLG TQETPLLFVP PPEPITERPI DRLIKAFQAA SPKSLAESVS
601: EISSVISMVD MIGGSFPSSG GSRAGLGEDL SERTRNFTTH EETNLSKRMK RSINIVPPDM SSQIDSYEQL SSLESEVVST TSSGLKVNNI APGYALLQEI
701: KETNGRLVET VVEICDEDSL GTIVTCTYAP VALSATFKDH YKSGKIAQIQ PLRLLFPMDY PYSSPIVLEE ISFDTSVHKY EDLSARTRSR FSLSMKEFSE
801: PGFSKGIAQT WNDCARATMV EYAERHGGGT FSSKYGAWET VLRAS
101: TYTRVLASQV VVNQAQSLPA LLPYMQTTTS QQWLQQNTQS NLCVICFAKS GPYNRSRFSK TDTCSVTAAA TSSAKFVETT YSTAFSSIKL TKHSITDQKS
201: VFDTTVLIMN IIVASQDSTG KTVNVNAGNW QEETYQKIKK LKEMCLPVLS LMHQRVAEKL RETESLPPQP MQAQWIEKLK AGKLSMEHLM FFLNVHRSSV
301: SEKHRDKFSQ YEYHILKFTK SQTMVLRPTQ QQQGQFPPSQ TAMQTQSPQV HVSQSLYKEQ RRSRLMPSSQ NEASSLLQIR PKLDPRDENI IMASSGNVML
401: PSVKQNPRAV NTNISSVQSL QKQKRFHHRQ MQQQQPQQGN HQHQMQTNEM NDVRMRERVN IKARLLEQQV SSSQRQVPKQ ESNVSSSQIQ NHSSPQLVDQ
501: HILPATINKT GTPLNSSGSA FVAPAPSPVP GDSEMPISVE SPVSGVDEIN STLDSSSKLG TQETPLLFVP PPEPITERPI DRLIKAFQAA SPKSLAESVS
601: EISSVISMVD MIGGSFPSSG GSRAGLGEDL SERTRNFTTH EETNLSKRMK RSINIVPPDM SSQIDSYEQL SSLESEVVST TSSGLKVNNI APGYALLQEI
701: KETNGRLVET VVEICDEDSL GTIVTCTYAP VALSATFKDH YKSGKIAQIQ PLRLLFPMDY PYSSPIVLEE ISFDTSVHKY EDLSARTRSR FSLSMKEFSE
801: PGFSKGIAQT WNDCARATMV EYAERHGGGT FSSKYGAWET VLRAS
Arabidopsis Description
MED15CProbable mediator of RNA polymerase II transcription subunit 15c [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.