Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36587 | Canola | nucleus | 83.17 | 90.7 |
| CDX81731 | Canola | plastid | 53.11 | 82.07 |
| CDY53314 | Canola | mitochondrion, nucleus | 53.19 | 81.32 |
| CDX83970 | Canola | mitochondrion | 69.87 | 76.13 |
| AT1G15780.2 | Thale cress | nucleus | 77.25 | 73.57 |
| CDY53315 | Canola | nucleus | 11.07 | 64.29 |
| CDX81732 | Canola | nucleus | 11.22 | 60.08 |
| CDY33379 | Canola | cytosol | 3.31 | 52.44 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 4.61 | 50.85 |
| CDY33382 | Canola | nucleus | 13.91 | 50.56 |
| CDY19981 | Canola | cytosol | 5.92 | 44.0 |
| CDY52868 | Canola | cytosol | 4.77 | 43.97 |
| CDY35039 | Canola | cytosol | 4.61 | 43.48 |
| CDY36589 | Canola | nucleus | 35.05 | 38.03 |
| CDY61380 | Canola | extracellular, vacuole | 11.84 | 37.56 |
| CDY00086 | Canola | nucleus | 12.45 | 37.5 |
| CDY19982 | Canola | nucleus | 15.99 | 33.66 |
| CDY35787 | Canola | nucleus | 21.83 | 31.91 |
| CDY00085 | Canola | nucleus | 20.22 | 30.58 |
| CDY66823 | Canola | cytosol, nucleus | 20.98 | 30.4 |
| CDX85281 | Canola | nucleus | 21.14 | 29.83 |
| CDX86356 | Canola | nucleus | 20.29 | 27.97 |
| CDY19980 | Canola | nucleus | 11.61 | 25.46 |
| CDY36595 | Canola | cytosol | 6.53 | 24.93 |
| CDY33381 | Canola | cytosol, extracellular | 5.92 | 23.84 |
| CDY36590 | Canola | cytosol | 5.23 | 23.21 |
| CDY33380 | Canola | cytosol | 7.15 | 20.53 |
| CDY36591 | Canola | cytosol | 7.15 | 17.85 |
Protein Annotations
| Gene3D:1.10.246.20 | MapMan:15.3.3.3.5 | GO:A0A078J527 | UniProt:A0A078J527 | EnsemblPlants:CDY61379 | ProteinID:CDY61379 |
| ProteinID:CDY61379.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00033762001 | InterPro:KIX_dom_sf |
| InterPro:MED15_KIX | PFAM:PF16987 | PANTHER:PTHR33137 | PANTHER:PTHR33137:SF4 | SUPFAM:SSF47040 | UniParc:UPI0004EED89D |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g49890DBnaC05g49890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J527]
Coordinates
chrLK033990:-:20506..27357
Molecular Weight (calculated)
142361.0 Da
IEP (calculated)
9.397
GRAVY (calculated)
-0.707
Length
1301 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRTCVILHNM IVEDERHRYT LADTSEFESG ESSRSAKEHL MDNNNWRLSI PNGESAAMNN GEWRKQLPPD SRQKIVNKIM ETLSRHLPNS GPEGIIDLRR
0101: IAARFEEKIF SCAVNQTDYL RKISMKMLTM ETKSQNAAGS SSTTPDANNT TSMDSIPNNQ GQLLPGTLPN NQSQAPQPLM SQTIQSNTAS GITGSTGLPS
0201: SMPPVSSIAN NSVVNQNSSM QNVAGLLQDS SGQHGVSSNM LSGSQRQMLG RPPHTMSSQQ QQPQGAQYLY QQQQLLRQNF QAGNVPNPNS LLPTHIQQQQ
0301: QQQNVLQPNQ MHSSQQPAST TSATQPSAVS SAPIQGLHTN QQSSPQLSSQ QTTSQTILRQ QQSSLLRQHP QSQQSSGIHQ QQTSLPQQSI SPQQQAQMMR
0401: QQAASGSGIQ QKQMMGQHKQ HPPAQQQLMS QQNSLQATTQ QPLGTQSNVA GLQQPQQQLL SSQVGNSSLQ TNQQSLHMLS QPTAALQRTH QAGHGLYPSQ
0501: GQQSQNQPAQ QQMVPLQSHR QQLQQPNLVQ QDVQQRLLSS GQVAGSLLPP QNVVDQQRQL YQSQRTLLEM PSSSLDSTAQ TESGNAVDWQ EEVFQKIKIM
0601: KDAYLPDVTE IYQRVIAKLQ QMDSLPQQQR SEQFEKLKQF KTMLERMMQF LSVSKSSIMP PLKNKVAIYE KQIIDFVTAH RPRKPVQQGQ LPQSQMQPMQ
0701: QQSSQNGNHS HDGQANPQMQ SMSMPRAQQS SLENVQNNVL SSRPGASAPQ QNIHSSVPAS SLESGQGNAL NNGQQVAMRS IQQNTYQQVN NTSASAQSGL
0801: STLQPNVNQT QLSSGLLQQQ KDQQMTQQQQ LKQQFQQRQM QQQQQQLLQK QRLMQQHQEQ LQARQQVAQN DLKPGSQLPV TSPQLLPGSS PQMTQQHSSP
0901: QIDQKNMMSS VNKMGTPVQP ANSPFVVPSP ATPVAPSPMQ VDSEKPSGAS SLSMGNTARQ QATGVQGVVQ SIAFGTPGIS ASPLLQEFTS PEGNNLNPLT
1001: STFGKPSATE LPIERLIRAV KSISPQSLSS AVSDIGSVVS MVDRIAGSAP GNGSRASVGE DFVAKTKCRL QARNFMAQEG MTPTKKMKRH ATAMPLSVYS
1101: LGGSVGDNCK QFACSETSDL ESTATSVGKK ARTETEHALL EEIKEINQRL IDTVVEISDE EDATDSSEGA TASKGCEGTT VRFSFIAVSL SPALKAHFSL
1201: TQMSPIQPLR LLVPCSYPNG SPSLLDKLPV ETSKENEDLS SKAVARFNIL LRSLSQPMSL KDIATTWDAC ARTVICEYAQ QFGGGTFSSK YSTWEKFVAA
1301: S
0101: IAARFEEKIF SCAVNQTDYL RKISMKMLTM ETKSQNAAGS SSTTPDANNT TSMDSIPNNQ GQLLPGTLPN NQSQAPQPLM SQTIQSNTAS GITGSTGLPS
0201: SMPPVSSIAN NSVVNQNSSM QNVAGLLQDS SGQHGVSSNM LSGSQRQMLG RPPHTMSSQQ QQPQGAQYLY QQQQLLRQNF QAGNVPNPNS LLPTHIQQQQ
0301: QQQNVLQPNQ MHSSQQPAST TSATQPSAVS SAPIQGLHTN QQSSPQLSSQ QTTSQTILRQ QQSSLLRQHP QSQQSSGIHQ QQTSLPQQSI SPQQQAQMMR
0401: QQAASGSGIQ QKQMMGQHKQ HPPAQQQLMS QQNSLQATTQ QPLGTQSNVA GLQQPQQQLL SSQVGNSSLQ TNQQSLHMLS QPTAALQRTH QAGHGLYPSQ
0501: GQQSQNQPAQ QQMVPLQSHR QQLQQPNLVQ QDVQQRLLSS GQVAGSLLPP QNVVDQQRQL YQSQRTLLEM PSSSLDSTAQ TESGNAVDWQ EEVFQKIKIM
0601: KDAYLPDVTE IYQRVIAKLQ QMDSLPQQQR SEQFEKLKQF KTMLERMMQF LSVSKSSIMP PLKNKVAIYE KQIIDFVTAH RPRKPVQQGQ LPQSQMQPMQ
0701: QQSSQNGNHS HDGQANPQMQ SMSMPRAQQS SLENVQNNVL SSRPGASAPQ QNIHSSVPAS SLESGQGNAL NNGQQVAMRS IQQNTYQQVN NTSASAQSGL
0801: STLQPNVNQT QLSSGLLQQQ KDQQMTQQQQ LKQQFQQRQM QQQQQQLLQK QRLMQQHQEQ LQARQQVAQN DLKPGSQLPV TSPQLLPGSS PQMTQQHSSP
0901: QIDQKNMMSS VNKMGTPVQP ANSPFVVPSP ATPVAPSPMQ VDSEKPSGAS SLSMGNTARQ QATGVQGVVQ SIAFGTPGIS ASPLLQEFTS PEGNNLNPLT
1001: STFGKPSATE LPIERLIRAV KSISPQSLSS AVSDIGSVVS MVDRIAGSAP GNGSRASVGE DFVAKTKCRL QARNFMAQEG MTPTKKMKRH ATAMPLSVYS
1101: LGGSVGDNCK QFACSETSDL ESTATSVGKK ARTETEHALL EEIKEINQRL IDTVVEISDE EDATDSSEGA TASKGCEGTT VRFSFIAVSL SPALKAHFSL
1201: TQMSPIQPLR LLVPCSYPNG SPSLLDKLPV ETSKENEDLS SKAVARFNIL LRSLSQPMSL KDIATTWDAC ARTVICEYAQ QFGGGTFSSK YSTWEKFVAA
1301: S
0001: MNFVDVIKFA YFEFLDSRSE NLMDNNNWRP SLPNGEPAMD TGDWRTQLPP DSRQKIVNKI METLKKHLPF SGPEGINELR RIAARFEEKI FSGALNQTDY
0101: LRKISMKMLT METKSQNAAG SSAAIPAANN GTSIDSIPTN QGQLLPGSLS TNQSQAPQPL LSQTMQNNTA SGMTGSTALP SSMPPVSSIT NNNTTSVVNQ
0201: NANMQNVAGM LQDSSGQHGL SSNMFSGPQR QMLGRPHAMS SQQQQQPYLY QQQLQQQLLK QNFQSGNVPN PNSLLPSHIQ QQQQNVLQPN QLHSSQQPGV
0301: PTSATQPSTV NSAPLQGLHT NQQSSPQLSS QQTTQSMLRQ HQSSMLRQHP QSQQASGIHQ QQSSLPQQSI SPLQQQPTQL MRQQAANSSG IQQKQMMGQH
0401: VVGDMQQQHQ QRLLNQQNNV MNIQQQQSQQ QPLQQPQQQQ KQQPPAQQQL MSQQNSLQAT HQNPLGTQSN VAGLQQPQQQ MLNSQVGNSS LQNNQHSVHM
0501: LSQPTVGLQR THQAGHGLYS SQGQQSQNQP SQQQMMPQLQ SHHQQLGLQQ QPNLLQQDVQ QRLQASGQVT GSLLPPQNVV DQQRQLYQSQ RTLPEMPSSS
0601: LDSTAQTESA NGGDWQEEVY QKIKSMKETY LPDLNEIYQR VAAKLQQDSM PQQQRSDQLE KLRQFKTMLE RMIQFLSVSK SNIMPALKDK VAYYEKQIIG
0701: FLNMHRPRKP VQQGQLPQSQ MQPMQQPQSQ TVQDQSHDNQ TNPQMQSMSM QGAGPRAQQS SMTNMQSNVL SSRPGVSAPQ QNIPSSIPAS SLESGQGNTL
0801: NNGQQVAMGS MQQNTSQLVN NSSASAQSGL STLQSNVNQP QLSSSLLQHQ HLKQQQDQQM QLKQQFQQRQ MQQQQLQARQ QQQQQQLQAR QQAAQLQQMN
0901: DMNDLTSRQG MNVSRGMFQQ HSMQGQRANY PLQQLKPGAV SSPQLLQGAS PQMSQHLSPQ VDQKNTVNKM GTPLQPANSP FVVPSPSSTP LAPSPMQVDS
1001: EKPGSSSLSM GNIARQQATG MQGVVQSLAI GTPGISASPL LQEFTSPDGN ILNSSTITSG KPSATELPIE RLIRAVKSIS PQALSSAVSD IGSVVSMVDR
1101: IAGSAPGNGS RASVGEDLVA MTKCRLQARN FMTQEGMMAT KKMKRHTTAM PLSVASLGGS VGDNYKQFAG SETSDLESTA TSDGKKARTE TEHALLEEIK
1201: EINQRLIDTV VEISDDEDAA DPSEVAISSI GCEGTTVRFS FIAVSLSPAL KAHLSSTQMS PIQPLRLLVP CSYPNGSPSL LDKLPVETSK ENEDLSSKAM
1301: ARFNILLRSL SQPMSLKDIA KTWDACARAV ICEYAQQFGG GTFSSKYGTW EKYVAAS
0101: LRKISMKMLT METKSQNAAG SSAAIPAANN GTSIDSIPTN QGQLLPGSLS TNQSQAPQPL LSQTMQNNTA SGMTGSTALP SSMPPVSSIT NNNTTSVVNQ
0201: NANMQNVAGM LQDSSGQHGL SSNMFSGPQR QMLGRPHAMS SQQQQQPYLY QQQLQQQLLK QNFQSGNVPN PNSLLPSHIQ QQQQNVLQPN QLHSSQQPGV
0301: PTSATQPSTV NSAPLQGLHT NQQSSPQLSS QQTTQSMLRQ HQSSMLRQHP QSQQASGIHQ QQSSLPQQSI SPLQQQPTQL MRQQAANSSG IQQKQMMGQH
0401: VVGDMQQQHQ QRLLNQQNNV MNIQQQQSQQ QPLQQPQQQQ KQQPPAQQQL MSQQNSLQAT HQNPLGTQSN VAGLQQPQQQ MLNSQVGNSS LQNNQHSVHM
0501: LSQPTVGLQR THQAGHGLYS SQGQQSQNQP SQQQMMPQLQ SHHQQLGLQQ QPNLLQQDVQ QRLQASGQVT GSLLPPQNVV DQQRQLYQSQ RTLPEMPSSS
0601: LDSTAQTESA NGGDWQEEVY QKIKSMKETY LPDLNEIYQR VAAKLQQDSM PQQQRSDQLE KLRQFKTMLE RMIQFLSVSK SNIMPALKDK VAYYEKQIIG
0701: FLNMHRPRKP VQQGQLPQSQ MQPMQQPQSQ TVQDQSHDNQ TNPQMQSMSM QGAGPRAQQS SMTNMQSNVL SSRPGVSAPQ QNIPSSIPAS SLESGQGNTL
0801: NNGQQVAMGS MQQNTSQLVN NSSASAQSGL STLQSNVNQP QLSSSLLQHQ HLKQQQDQQM QLKQQFQQRQ MQQQQLQARQ QQQQQQLQAR QQAAQLQQMN
0901: DMNDLTSRQG MNVSRGMFQQ HSMQGQRANY PLQQLKPGAV SSPQLLQGAS PQMSQHLSPQ VDQKNTVNKM GTPLQPANSP FVVPSPSSTP LAPSPMQVDS
1001: EKPGSSSLSM GNIARQQATG MQGVVQSLAI GTPGISASPL LQEFTSPDGN ILNSSTITSG KPSATELPIE RLIRAVKSIS PQALSSAVSD IGSVVSMVDR
1101: IAGSAPGNGS RASVGEDLVA MTKCRLQARN FMTQEGMMAT KKMKRHTTAM PLSVASLGGS VGDNYKQFAG SETSDLESTA TSDGKKARTE TEHALLEEIK
1201: EINQRLIDTV VEISDDEDAA DPSEVAISSI GCEGTTVRFS FIAVSLSPAL KAHLSSTQMS PIQPLRLLVP CSYPNGSPSL LDKLPVETSK ENEDLSSKAM
1301: ARFNILLRSL SQPMSLKDIA KTWDACARAV ICEYAQQFGG GTFSSKYGTW EKYVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.