Factsheet for Zm00001d042764_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017373_P001
Zm00001d029743_P001
Zm00001d051242_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54290.1	Zm00001d017373_P001	AT4G21670.1	18541146
AT3G54290.1	Zm00001d029743_P001	AT4G21670.1	18541146
AT3G54290.1	Zm00001d051242_P002	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01796	Sorghum	mitochondrion, plastid	98.5	98.26
TraesCS3A01G374300.1	Wheat	mitochondrion	55.86	89.6
Os01t0861700-00	Rice	plasma membrane	85.79	84.73
Zm00001d012290_P001	Maize	cytosol	44.14	83.89
HORVU3Hr1G084020.2	Barley	plastid	83.54	82.31
GSMUA_Achr3P22630_001	Banana	mitochondrion, plastid	39.65	46.49
VIT_13s0101g00520.t01	Wine grape	cytosol	24.19	35.53
PGSC0003DMT400061575	Potato	cytosol	28.43	34.97
Solyc11g006830.1.1	Tomato	cytosol	28.18	34.66
KRG90752	Soybean	cytosol	27.93	33.94
KRH36010	Soybean	cytosol	27.43	33.64
AT3G54290.1	Thale cress	plastid	28.43	32.57
CDX76154	Canola	plastid	25.69	31.6
Bra014824.1-P	Field mustard	plastid	25.69	31.6
KRH33267	Soybean	cytosol	26.93	31.4
CDY13198	Canola	plastid	21.95	30.45
Bra007062.1-P	Field mustard	plastid	26.18	28.93
CDX78227	Canola	cytosol, plastid	25.94	28.49
CDX73491	Canola	plastid	24.94	27.55

Protein Annotations

EnsemblPlants:Zm00001d042764_P001	EnsemblPlants:Zm00001d042764_T001	EnsemblPlantsGene:Zm00001d042764	EntrezGene:103650976	Gene3D:1.20.120.520	InterPro:Haemerythrin-like
PANTHER:PTHR35739	PFAM:PF01814	ProteinID:ONM36239.1	SEG:seg	UniParc:UPI000221ED32	UniProt:A0A1D6N6L5
MapMan:35.2	:	:	:	:	:

Description

hemerythrin HHE cation-binding domain protein

Coordinates

chr3:-:179106859..179111055

Molecular Weight (calculated)

44125.1 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.331

Length

401 amino acids

Sequence
(BLAST)

001: MGNCSPSPRR RRPTEPDSPP LGSTVSAPTV TVNSISVSSY ALARSPSVSA AAVDAEDAGV VRVYGSDGCP VAWRLRVSLL YKAAAPLHFT PSEAAPLGRP
101: VLRLSAADPE VCGTADELLR LVDARFEGKP RVAPPERPRA ASPSAAAAAE VAELVRLQHR SAERHLEGVA AKVAEMVKKG KKSGKGRNVV EGAEVRRLGK
201: WYGDAMEVML EHARMEETLI FPDIQRASFP GVCDKVNEQH GRHLPMMNGI KEDIKTLLTL ELGSPLFHEV VVNLSVRLKA LQDHTKEHFK EEESDLLPRL
301: EQVRRMQREE GKVSDKSSSA WASEAVATME MTHSKLFPFF MTGLLPQEAM QYLDLVCRCT KNTRHLVSML RSLAERLEDA NPSIIHNNPT KLYEHLLVKS
401: P

Best Arabidopsis Sequence Match ( AT3G54290.1 )
(BLAST)

001: MGTCFSSSTK STAEISPFDL VVKPPPPSAA ATAPPTQRIP TAKTETSTVS FTATVRLYGP PNSLVTSYLR FALLHKKVPL RFVPSEDQKP TIQVGSETVS
101: GSREVLLRYI EDKFPEPRLM IWKFNLEGFD EATPLIVKMI WLQHRSMLWH MERMLRWSED LAARGGKKAV DPSVGTPKME IRKFAKSYTH LQELMLEHAQ
201: MEERILFPVL ESVDRGMCKS ANEEHGRELP MMNGIKEDIK SIGVLDSGIC SEALFSLASR FKSLQMMCKT HFEEEEKDLL PMVEAAEMGK EKQKKLMNQS
301: LEVMSGTHSN SFDFLLEGLT PQEAMQYIDL LMTFGDPNLI SSFLCSDVVD

Arabidopsis Description

At3g54290 [Source:UniProtKB/TrEMBL;Acc:Q8RWC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.