Factsheet for GSMUA_Achr3P22630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P14120_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54290.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G54290.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G54290.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G54290.1	GSMUA_Achr8P14120_001	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0101g00520.t01	Wine grape	cytosol	36.55	45.79
TraesCS3A01G374300.1	Wheat	mitochondrion	32.46	44.4
Solyc11g006830.1.1	Tomato	cytosol	41.81	43.87
PGSC0003DMT400061575	Potato	cytosol	41.23	43.25
CDY13198	Canola	plastid	33.92	40.14
Bra014824.1-P	Field mustard	plastid	38.01	39.88
CDX76154	Canola	plastid	38.01	39.88
Zm00001d042764_P001	Maize	plastid	46.49	39.65
EES01796	Sorghum	mitochondrion, plastid	46.2	39.3
Os01t0861700-00	Rice	plasma membrane	46.49	39.16
HORVU3Hr1G084020.2	Barley	plastid	45.91	38.57
KRG90752	Soybean	cytosol	37.13	38.48
KRH36010	Soybean	cytosol	36.26	37.92
AT3G54290.1	Thale cress	plastid	38.6	37.71
KRH33267	Soybean	cytosol	36.84	36.63
Bra007062.1-P	Field mustard	plastid	37.72	35.54
CDX78227	Canola	cytosol, plastid	37.72	35.34
Zm00001d012290_P001	Maize	cytosol	21.34	34.6
CDX73491	Canola	plastid	36.55	34.44

Protein Annotations

EnsemblPlants:GSMUA_Achr3P22630_001	EnsemblPlants:GSMUA_Achr3T22630_001	EnsemblPlantsGene:GSMUA_Achr3G22630_001	Gene3D:1.20.120.520	InterPro:Haemerythrin-like	InterPro:Thioredoxin-like_sf
PANTHER:PTHR35739	PFAM:PF01814	SEG:seg	SUPFAM:SSF52833	UniParc:UPI0002957573	UniProt:M0SGX9
MapMan:35.2	:	:	:	:	:

Description

Putative hemerythrin family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G22630_001]

Coordinates

chr3:-:23543260..23544687

Molecular Weight (calculated)

37995.9 Da

IEP (calculated)

5.864

GRAVY (calculated)

-0.218

Length

342 amino acids

Sequence
(BLAST)

001: MGNCAPKPKP RSRPAQHSSS LLTPDFPAVR LYGPESCPIS SCLRLALLYK SVPFQFVPRS PLLGLPFLQC GADTVVGAAD SLLRELDSRF PRPPTTATAL
101: ADMTSAAEEV ALVTALQHRS VERHVEELAR WATEMASGGG GRKGEAARME RSYGQLAEVV LEHAQMEERL LFPAFESAAD RGVCKVANEE HARDLPIING
201: IKEDIKSMVV MEAGTPFHQE ALLNLSLRLK TLEEHFKGHF QEEEKNMLPL LEMAMRSQRE EGEDESSSRS WMEQVLVLME ATHSPRLFPF FMAGLLPEEA
301: MQYVGLVCRQ TADQQRLASM LRSLITVLET KQSIVGILRQ PT

Best Arabidopsis Sequence Match ( AT3G54290.1 )
(BLAST)

001: MGTCFSSSTK STAEISPFDL VVKPPPPSAA ATAPPTQRIP TAKTETSTVS FTATVRLYGP PNSLVTSYLR FALLHKKVPL RFVPSEDQKP TIQVGSETVS
101: GSREVLLRYI EDKFPEPRLM IWKFNLEGFD EATPLIVKMI WLQHRSMLWH MERMLRWSED LAARGGKKAV DPSVGTPKME IRKFAKSYTH LQELMLEHAQ
201: MEERILFPVL ESVDRGMCKS ANEEHGRELP MMNGIKEDIK SIGVLDSGIC SEALFSLASR FKSLQMMCKT HFEEEEKDLL PMVEAAEMGK EKQKKLMNQS
301: LEVMSGTHSN SFDFLLEGLT PQEAMQYIDL LMTFGDPNLI SSFLCSDVVD

Arabidopsis Description

At3g54290 [Source:UniProtKB/TrEMBL;Acc:Q8RWC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.