Factsheet for HORVU3Hr1G084020.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091030.9
HORVU6Hr1G060230.12

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54290.1	HORVU2Hr1G091030.9	AT4G21670.1	18541146
AT3G54290.1	HORVU6Hr1G060230.12	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G374300.1	Wheat	mitochondrion	60.44	98.4
Os01t0861700-00	Rice	plasma membrane	85.01	85.22
EES01796	Sorghum	mitochondrion, plastid	82.56	83.58
Zm00001d042764_P001	Maize	plastid	82.31	83.54
Zm00001d012290_P001	Maize	cytosol	39.31	75.83
GSMUA_Achr3P22630_001	Banana	mitochondrion, plastid	38.57	45.91
VIT_13s0101g00520.t01	Wine grape	cytosol	23.34	34.8
Solyc11g006830.1.1	Tomato	cytosol	27.52	34.36
PGSC0003DMT400061575	Potato	cytosol	27.52	34.36
AT3G54290.1	Thale cress	plastid	28.75	33.43
Bra014824.1-P	Field mustard	plastid	26.04	32.52
CDX76154	Canola	plastid	26.04	32.52
KRG90752	Soybean	cytosol	26.29	32.42
KRH36010	Soybean	cytosol	25.8	32.11
KRH33267	Soybean	cytosol	27.03	31.98
CDY13198	Canola	plastid	22.11	31.14
Bra007062.1-P	Field mustard	plastid	26.04	29.2
CDX78227	Canola	cytosol, plastid	26.04	29.04
CDX73491	Canola	plastid	25.31	28.37

Protein Annotations

EnsemblPlants:HORVU3Hr1G084020.2	EnsemblPlantsGene:HORVU3Hr1G084020	Gene3D:1.20.120.520	InterPro:Haemerythrin-like	PANTHER:PTHR35739	PFAM:PF01814
SEG:seg	UniParc:UPI000B45FF58	UniProt:A0A287M0B9	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:+:605995391..605998994

Molecular Weight (calculated)

44737.8 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.428

Length

407 amino acids

Sequence
(BLAST)

001: MGNCSPSPRR RRPSPAGSPP SHSSAASGGA SGGGGGNTVS PYALARSPSV SVSVDPEAER EREGVVRVYG SDGCPVAWRL RVALLYKAAA PVHFTPSEAA
101: PLGRPVLRLS AADPELCGAA DELLRHVDAR FEGKPRVAPP DRPPRASLAA AAAEEVAEMV RLQHRSAERH LEGVAAKLAE MVKKGAKKAA KGRNVVEAAE
201: VRRLGKWYGD AMEVMLEHAR MEERVLFPDI QRASFPGVCD KVQEQHGKHL PMMNGIKEDI KTLLTLELGS ALFYEVLVNL SVRLKALQDH TKEHFKEEEK
301: DMLPRLESVR RMQREEGNVP DKSNSGWASE AMGTMEMTHS KLFPFFMTGL MPQEAVQYLD LVCRCTKNTR HLVSMLRSLA ERLEDANPSI IHNNPTRLYE
401: HLLVKSP

Best Arabidopsis Sequence Match ( AT3G54290.1 )
(BLAST)

001: MGTCFSSSTK STAEISPFDL VVKPPPPSAA ATAPPTQRIP TAKTETSTVS FTATVRLYGP PNSLVTSYLR FALLHKKVPL RFVPSEDQKP TIQVGSETVS
101: GSREVLLRYI EDKFPEPRLM IWKFNLEGFD EATPLIVKMI WLQHRSMLWH MERMLRWSED LAARGGKKAV DPSVGTPKME IRKFAKSYTH LQELMLEHAQ
201: MEERILFPVL ESVDRGMCKS ANEEHGRELP MMNGIKEDIK SIGVLDSGIC SEALFSLASR FKSLQMMCKT HFEEEEKDLL PMVEAAEMGK EKQKKLMNQS
301: LEVMSGTHSN SFDFLLEGLT PQEAMQYIDL LMTFGDPNLI SSFLCSDVVD

Arabidopsis Description

At3g54290 [Source:UniProtKB/TrEMBL;Acc:Q8RWC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.