Factsheet for Zm00001d047993_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028307_P001	Maize	nucleus	64.51	67.05
TraesCS4B01G235000.1	Wheat	nucleus	54.69	55.81
TraesCS4A01G059400.1	Wheat	nucleus	54.46	55.58
TraesCS4D01G236400.2	Wheat	nucleus	54.46	55.58
Os03t0230300-01	Rice	nucleus	53.57	51.84
HORVU4Hr1G065800.1	Barley	nucleus, plastid	49.33	42.75
GSMUA_Achr7P27570_001	Banana	cytosol, nucleus, plastid	27.9	32.72
GSMUA_Achr5P08960_001	Banana	mitochondrion, nucleus	34.82	32.7
Solyc01g057370.1.1	Tomato	nucleus	19.87	28.25
Solyc04g077070.1.1	Tomato	cytosol, extracellular, nucleus, plastid	12.95	26.85
VIT_18s0001g08290.t01	Wine grape	plastid	29.02	26.8
Solyc04g077080.1.1	Tomato	cytosol	20.98	25.61
Solyc01g057360.1.1	Tomato	cytosol	16.74	24.35
PGSC0003DMT400012725	Potato	cytosol	22.54	24.22
Solyc04g077100.2.1	Tomato	plastid	22.99	23.73
Solyc04g077090.1.1	Tomato	cytosol	23.21	23.48
PGSC0003DMT400012724	Potato	cytosol, nucleus, plastid	26.12	22.94
PGSC0003DMT400093081	Potato	nucleus	8.48	20.11
Zm00001d030110_P001	Maize	mitochondrion, nucleus	25.0	18.79
Zm00001d014423_P002	Maize	nucleus	24.78	18.11
Zm00001d012821_P003	Maize	extracellular, vacuole	23.44	16.01
Zm00001d052295_P024	Maize	cytosol	24.78	11.78

Protein Annotations

EntrezGene:100279545	Gene3D:3.90.228.10	MapMan:35.1	ProteinID:AQL08286.1	UniProt:B7ZYN8	EMBL:BT054430
EMBL:BT063363	GO:GO:0003674	GO:GO:0003824	GO:GO:0003950	GO:GO:0016740	InterPro:IPR012317
InterPro:IPR016126	PFAM:PF12174	PFscan:PS51059	PFscan:PS51311	PANTHER:PTHR32263	PANTHER:PTHR32263:SF5
InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	SUPFAM:SSF56399	InterPro:Secretoglobin	UniParc:UPI000191734C	EnsemblPlantsGene:Zm00001d047993
EnsemblPlants:Zm00001d047993_P001	EnsemblPlants:Zm00001d047993_T001	SEG:seg	:	:	:

Description

Probable inactive poly [ADP-ribose] polymerase SRO1

Coordinates

chr9:+:147425381..147428673

Molecular Weight (calculated)

48041.8 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.364

Length

448 amino acids

Sequence
(BLAST)

001: MDCSSGDVKA ETTRPAAVAA AAAAAAGGGT PSLLRGWREF RRSAVPARFL CFEDGKWVDV AGEAAAQLRR AFQERRVMAD ASCGGKAYLF DFLRMVRIDE
101: ATGEETGLAW IDHRGGCFFP APAACGGGRK RGRDDDGAPA EDKAEAESSS AASGVDDRSG GESRGADAKR RKALGNAAAS LGEKDRSYQV VSKLFLEYGM
201: AQRGAAVTAV RKVACGARAA AFRDQGRLLA DARGAAAGSA KFAWYGASAD DVAAVVDRGF ASNNAPRLGA HKHGDGVHLS PPHCPYRSAT LAKADGSGEA
301: HIVLCRVLMG RPEAVPAGSS QSCPSSHNYD SAVDKLDNTQ WYVVWNQDMN TRILPEYVVS FKCSKLQLTQ ELSEATSKLK KPSRVARDMF PTLLAEIEKI
401: VPDKCDLLQE SYSRFKMGRI KKDQFIRFLR NYVGDKVLTT VAKKLRGC

Best Arabidopsis Sequence Match ( AT2G35510.1 )
(BLAST)

001: MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GNILPTTQSR HESSGLTLEG PKGSPSNEPG RVSNGGSGSE KNSSSSRRPR
501: SPIMPFPLLF KAISSKIARK DMDLIIAGYQ ELREKKVSRK EFYKTLSMIV GDDDLLISTI TGLQRSLG

Arabidopsis Description

SRO1Probable inactive poly [ADP-ribose] polymerase SRO1 [Source:UniProtKB/Swiss-Prot;Acc:O82289]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.