Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012724 | Potato | cytosol, nucleus, plastid | 76.5 | 65.1 |
| Solyc04g077070.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 23.27 | 46.76 |
| Solyc01g057370.1.1 | Tomato | nucleus | 32.95 | 45.4 |
| Solyc04g077080.1.1 | Tomato | cytosol | 38.02 | 44.96 |
| Solyc04g077090.1.1 | Tomato | cytosol | 38.48 | 37.7 |
| Solyc01g057360.1.1 | Tomato | cytosol | 24.42 | 34.42 |
| GSMUA_Achr7P27570_001 | Banana | cytosol, nucleus, plastid | 25.81 | 29.32 |
| VIT_18s0001g08290.t01 | Wine grape | plastid | 29.72 | 26.6 |
| GSMUA_Achr5P08960_001 | Banana | mitochondrion, nucleus | 27.88 | 25.37 |
| TraesCS4A01G059400.1 | Wheat | nucleus | 24.42 | 24.15 |
| TraesCS4B01G235000.1 | Wheat | nucleus | 24.19 | 23.92 |
| TraesCS4D01G236400.2 | Wheat | nucleus | 24.19 | 23.92 |
| EER92605 | Sorghum | nucleus | 24.42 | 23.61 |
| Zm00001d047993_P001 | Maize | cytosol, nucleus, plastid | 23.73 | 22.99 |
| Zm00001d028307_P001 | Maize | nucleus | 22.58 | 22.74 |
| Os03t0230300-01 | Rice | nucleus | 23.73 | 22.25 |
| Solyc05g005290.2.1 | Tomato | cytosol | 11.52 | 21.46 |
| HORVU4Hr1G065800.1 | Barley | nucleus, plastid | 24.88 | 20.89 |
| Solyc05g005280.2.1 | Tomato | cytosol | 14.29 | 20.39 |
| Solyc03g114360.2.1 | Tomato | nucleus | 14.75 | 17.07 |
| Solyc08g076420.2.1 | Tomato | nucleus | 21.66 | 15.75 |
| Solyc08g005270.2.1 | Tomato | nucleus | 20.97 | 15.17 |
| Solyc06g066330.2.1 | Tomato | nucleus | 20.74 | 15.15 |
Protein Annotations
| EnsemblPlants:Solyc04g077100.2.1 | EnsemblPlantsGene:Solyc04g077100.2 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:WWE_dom_sf | PANTHER:PTHR32263 |
| PANTHER:PTHR32263:SF5 | PFAM:PF00644 | PFscan:PS51059 | SUPFAM:SSF117839 | SUPFAM:SSF56399 | UniParc:UPI0002766255 |
| UniProt:K4BUE7 | MapMan:35.1 | : | : | : | : |
Description
Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:K4BUE7]
Coordinates
chr4:+:62056805..62058504
Molecular Weight (calculated)
48001.8 Da
IEP (calculated)
6.607
GRAVY (calculated)
-0.181
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAPAGSCA PMIASGEMDS VSAVLNGNKV EILVPLERTA GGSGKKVRVE VPRNWLIPSA RSTDHAQLLV QNHQNFKVSG MPARIMMFKD GSWVDFEKSA
101: MDVLVSAFVS GEAMVETVMG GFTFIFDFYR MIGINLDSGN ELPIAWIDVG GNSFYPKVFV EGSENLDKNE VNVDEKFSSE NGKVEFEIKI IERNSAGEVL
201: GKRKMGSEEN EVVREVGSSS RDVIEQRVVS TPTELLPPKW PRTRSLGNEE ESYRKASSLL ISILKVGVTV TAVHQCTRTG PVEQARLEVF VNNAKIVKRR
301: RGDPSVQYAW YGTSSAKIDS IMRRGFEMPR IIPGIQTHGV GIYMSPLYSP QKSHMMCEVD ENGEKHIMLC RVIVGKLEKV ELGSQQLFPS SAEFDTGVDD
401: LINPKLHVIW CSNMNTHILP IFIVSYKSGC HMSG
101: MDVLVSAFVS GEAMVETVMG GFTFIFDFYR MIGINLDSGN ELPIAWIDVG GNSFYPKVFV EGSENLDKNE VNVDEKFSSE NGKVEFEIKI IERNSAGEVL
201: GKRKMGSEEN EVVREVGSSS RDVIEQRVVS TPTELLPPKW PRTRSLGNEE ESYRKASSLL ISILKVGVTV TAVHQCTRTG PVEQARLEVF VNNAKIVKRR
301: RGDPSVQYAW YGTSSAKIDS IMRRGFEMPR IIPGIQTHGV GIYMSPLYSP QKSHMMCEVD ENGEKHIMLC RVIVGKLEKV ELGSQQLFPS SAEFDTGVDD
401: LINPKLHVIW CSNMNTHILP IFIVSYKSGC HMSG
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNGARGSG SANSVGSSTT
501: RPKSPWMPFP TLFAAISHKV AENDMLLINA DYQQLRDKKM TRAEFVRKLR VIVGDDLLRS TITTLQNQVR
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNGARGSG SANSVGSSTT
501: RPKSPWMPFP TLFAAISHKV AENDMLLINA DYQQLRDKKM TRAEFVRKLR VIVGDDLLRS TITTLQNQVR
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.