Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g077080.1.1 | Tomato | cytosol | 75.17 | 90.74 |
| Solyc01g057370.1.1 | Tomato | nucleus | 55.08 | 77.46 |
| PGSC0003DMT400012725 | Potato | cytosol | 64.33 | 68.35 |
| Solyc04g077070.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 21.22 | 43.52 |
| Solyc04g077100.2.1 | Tomato | plastid | 37.7 | 38.48 |
| Solyc01g057360.1.1 | Tomato | cytosol | 26.64 | 38.31 |
| GSMUA_Achr7P27570_001 | Banana | cytosol, nucleus, plastid | 25.28 | 29.32 |
| VIT_18s0001g08290.t01 | Wine grape | plastid | 31.83 | 29.07 |
| TraesCS4A01G059400.1 | Wheat | nucleus | 27.09 | 27.33 |
| TraesCS4B01G235000.1 | Wheat | nucleus | 26.86 | 27.11 |
| TraesCS4D01G236400.2 | Wheat | nucleus | 26.64 | 26.88 |
| GSMUA_Achr5P08960_001 | Banana | mitochondrion, nucleus | 27.77 | 25.79 |
| Solyc05g005290.2.1 | Tomato | cytosol | 13.09 | 24.89 |
| EER92605 | Sorghum | nucleus | 25.06 | 24.72 |
| Zm00001d028307_P001 | Maize | nucleus | 23.93 | 24.59 |
| Solyc05g005280.2.1 | Tomato | cytosol | 16.25 | 23.68 |
| Zm00001d047993_P001 | Maize | cytosol, nucleus, plastid | 23.48 | 23.21 |
| Os03t0230300-01 | Rice | nucleus | 23.93 | 22.89 |
| HORVU4Hr1G065800.1 | Barley | nucleus, plastid | 26.64 | 22.82 |
| Solyc03g114360.2.1 | Tomato | nucleus | 16.93 | 20.0 |
| Solyc08g076420.2.1 | Tomato | nucleus | 26.41 | 19.6 |
| Solyc08g005270.2.1 | Tomato | nucleus | 24.61 | 18.17 |
| Solyc06g066330.2.1 | Tomato | nucleus | 23.7 | 17.68 |
Protein Annotations
| EnsemblPlants:Solyc04g077090.1.1 | EnsemblPlantsGene:Solyc04g077090.1 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | PANTHER:PTHR32263 | PANTHER:PTHR32263:SF5 |
| PFAM:PF00644 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0002766254 | UniProt:K4BUE6 |
| MapMan:35.1 | : | : | : | : | : |
Description
Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:K4BUE6]
Coordinates
chr4:+:62040241..62041803
Molecular Weight (calculated)
50419.7 Da
IEP (calculated)
6.566
GRAVY (calculated)
-0.377
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSKTAIVSG NIKDGKLKLR NEVLPLGRWP DHAQLLYQNR HNFKESGKPL SFKMYKDGSW MDFEKHAMDV LISAFVSGKA IIEVETEAGF KLLIDFYRMF
101: GIDLDTGNEL PISWIDVNGN NFIPKIFIDD SENENPMIEK RGTEVGSSSQ LVIANPTESA PPKWARTRSM REEEYAYQTV KGYLLSSRSG VTITGIHQCM
201: ISGVREQVFK DNVEMLTRTR GNPKVVLAWY GTSSKNVDTI MHHGFELTRL EQGHRGIGIY LSPLESPQIS EMMSDVDENG EKHMILCRVI LGNPEKVELG
301: SQQLFSSNLD NFDTGVDDLN NPKLYVVWYH NMKTHILPEC IVSYKLDRHM PGQQNCGAHT EDRWCRLLFK LPNLLPLTKK LELKSLHNSY EVGKEVAHRH
401: FISDIEAIVQ DDQLMRSIIT EFLPEMRFCQ TCWDKKGIIV SXX
101: GIDLDTGNEL PISWIDVNGN NFIPKIFIDD SENENPMIEK RGTEVGSSSQ LVIANPTESA PPKWARTRSM REEEYAYQTV KGYLLSSRSG VTITGIHQCM
201: ISGVREQVFK DNVEMLTRTR GNPKVVLAWY GTSSKNVDTI MHHGFELTRL EQGHRGIGIY LSPLESPQIS EMMSDVDENG EKHMILCRVI LGNPEKVELG
301: SQQLFSSNLD NFDTGVDDLN NPKLYVVWYH NMKTHILPEC IVSYKLDRHM PGQQNCGAHT EDRWCRLLFK LPNLLPLTKK LELKSLHNSY EVGKEVAHRH
401: FISDIEAIVQ DDQLMRSIIT EFLPEMRFCQ TCWDKKGIIV SXX
001: MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GDYHLLFLL
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GDYHLLFLL
Arabidopsis Description
SRO1Probable inactive poly [ADP-ribose] polymerase SRO1 [Source:UniProtKB/Swiss-Prot;Acc:O82289]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.