Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P08960_001 | Banana | mitochondrion, nucleus | 47.91 | 38.36 |
| TraesCS4D01G236400.2 | Wheat | nucleus | 35.34 | 30.75 |
| TraesCS4B01G235000.1 | Wheat | nucleus | 35.08 | 30.52 |
| TraesCS4A01G059400.1 | Wheat | nucleus | 34.82 | 30.3 |
| Solyc04g077080.1.1 | Tomato | cytosol | 29.06 | 30.25 |
| Solyc01g057370.1.1 | Tomato | nucleus | 24.61 | 29.84 |
| Solyc04g077070.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 16.23 | 28.7 |
| Zm00001d028307_P001 | Maize | nucleus | 31.94 | 28.31 |
| Os03t0230300-01 | Rice | nucleus | 34.29 | 28.29 |
| EER92605 | Sorghum | nucleus | 32.98 | 28.06 |
| Zm00001d047993_P001 | Maize | cytosol, nucleus, plastid | 32.72 | 27.9 |
| VIT_18s0001g08290.t01 | Wine grape | plastid | 34.29 | 27.01 |
| HORVU4Hr1G065800.1 | Barley | nucleus, plastid | 35.86 | 26.5 |
| Solyc04g077100.2.1 | Tomato | plastid | 29.32 | 25.81 |
| PGSC0003DMT400012725 | Potato | cytosol | 27.75 | 25.42 |
| Solyc04g077090.1.1 | Tomato | cytosol | 29.32 | 25.28 |
| PGSC0003DMT400093081 | Potato | nucleus | 12.3 | 24.87 |
| Solyc01g057360.1.1 | Tomato | cytosol | 18.59 | 23.05 |
| PGSC0003DMT400012724 | Potato | cytosol, nucleus, plastid | 30.63 | 22.94 |
| GSMUA_Achr4P27510_001 | Banana | cytosol | 16.23 | 21.53 |
| GSMUA_Achr5P03800_001 | Banana | cytosol | 8.64 | 19.41 |
| GSMUA_Achr11P... | Banana | nucleus | 24.08 | 17.69 |
| GSMUA_Achr5P14120_001 | Banana | nucleus | 24.87 | 16.78 |
| GSMUA_Achr2P18060_001 | Banana | nucleus | 25.13 | 16.7 |
| GSMUA_Achr4P19000_001 | Banana | nucleus | 18.06 | 16.47 |
| GSMUA_Achr8P14660_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 23.56 | 16.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P27570_001 | EnsemblPlants:GSMUA_Achr7T27570_001 | EnsemblPlantsGene:GSMUA_Achr7G27570_001 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003950 | GO:GO:0016740 | InterPro:IPR004170 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:WWE-dom |
| InterPro:WWE_dom_sf | PANTHER:PTHR32263 | PFscan:PS50918 | PFscan:PS51059 | SEG:seg | SUPFAM:SSF117839 |
| SUPFAM:SSF56399 | UniParc:UPI0002969F34 | UniProt:M0TL93 | MapMan:35.1 | : | : |
Description
ATP8, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G27570_001]
Coordinates
chr7:-:28549648..28550867
Molecular Weight (calculated)
42035.2 Da
IEP (calculated)
5.578
GRAVY (calculated)
-0.321
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSNPRFST ATRLAADVEP APTDMASAAI LLRQSSSLTI REFKNYKKSA APSRFLFFRD GSWADFPPAV FDALREGFVA GKTAFELTVE GRPYFFDVLE
101: MLQVDLETGT VNSIAWIDVH GRCFFPAVGV DERSISALPN PEPEIECNPV GFWQEQSGES SGESSDETSA TSSLDQPRWP GAEAVRDGDK YFKIVEKLFL
201: SGFRRFAPNT IVTSIHKCSQ SGPLRASRLK TFRMHVEMTK AARGDANVRF GWYGASATEM ATIVSHGFGQ PNNRSLASGA RGVGVHLSEP HSPYLSSLST
301: DADASGERHM VLCRVIVGRP EMVEEGSVQY HPSSEEFDSG VDDIAHPTWY VVWSTHMNTH ILPESIVSYK PSTTQPQGTH TL
101: MLQVDLETGT VNSIAWIDVH GRCFFPAVGV DERSISALPN PEPEIECNPV GFWQEQSGES SGESSDETSA TSSLDQPRWP GAEAVRDGDK YFKIVEKLFL
201: SGFRRFAPNT IVTSIHKCSQ SGPLRASRLK TFRMHVEMTK AARGDANVRF GWYGASATEM ATIVSHGFGQ PNNRSLASGA RGVGVHLSEP HSPYLSSLST
301: DADASGERHM VLCRVIVGRP EMVEEGSVQY HPSSEEFDSG VDDIAHPTWY VVWSTHMNTH ILPESIVSYK PSTTQPQGTH TL
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNGARGSG SANSVGSSTT
501: RPKSPWMPFP TLFAAISHKV AENDMLLINA DYQQLRDKKM TRAEFVRKLR VIVGDDLLRS TITTLQNQVR
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNGARGSG SANSVGSSTT
501: RPKSPWMPFP TLFAAISHKV AENDMLLINA DYQQLRDKKM TRAEFVRKLR VIVGDDLLRS TITTLQNQVR
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.