Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024812.1-P | Field mustard | cytosol, nucleus, plastid | 80.45 | 82.1 |
| CDY03044 | Canola | nucleus | 80.2 | 82.05 |
| CDY45203 | Canola | cytosol, nucleus, plastid | 80.2 | 81.84 |
| VIT_01s0026g01590.t01 | Wine grape | nucleus | 59.4 | 59.7 |
| KRH74769 | Soybean | cytosol | 56.14 | 57.73 |
| KRH69365 | Soybean | cytosol | 55.89 | 56.46 |
| Solyc05g007020.2.1 | Tomato | nucleus | 54.39 | 54.52 |
| PGSC0003DMT400045475 | Potato | nucleus | 54.39 | 54.52 |
| GSMUA_Achr5P06380_001 | Banana | nucleus | 53.13 | 54.22 |
| PGSC0003DMT400068851 | Potato | nucleus | 52.38 | 54.15 |
| Solyc01g010480.2.1 | Tomato | cytosol | 51.88 | 53.77 |
| KRH58039 | Soybean | cytosol | 26.07 | 50.24 |
| Os01t0186200-01 | Rice | cytosol | 47.37 | 47.85 |
| TraesCS3A01G111100.2 | Wheat | cytosol | 45.61 | 46.19 |
| TraesCS3B01G129800.4 | Wheat | cytosol | 45.36 | 46.17 |
| TraesCS3D01G113100.2 | Wheat | cytosol | 45.86 | 45.75 |
| KXG31655 | Sorghum | cytosol | 44.86 | 44.75 |
| Zm00001d039530_P001 | Maize | cytosol | 42.86 | 42.54 |
| KRH07406 | Soybean | cytosol | 24.31 | 36.06 |
| HORVU3Hr1G020100.9 | Barley | mitochondrion | 42.11 | 35.07 |
Protein Annotations
| MapMan:26.1.2.4.1 | Gene3D:3.30.450.20 | EntrezGene:814800 | UniProt:A0A178VU83 | ProteinID:AAC05351.2 | EMBL:AB038798 |
| ProteinID:AEC05613.1 | ProteinID:AEC05614.1 | ArrayExpress:AT2G02710 | EnsemblPlantsGene:AT2G02710 | RefSeq:AT2G02710 | TAIR:AT2G02710 |
| RefSeq:AT2G02710-TAIR-G | EnsemblPlants:AT2G02710.1 | TAIR:AT2G02710.1 | EMBL:AY045642 | EMBL:AY058232 | Unigene:At.12414 |
| GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009881 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0018298 |
| GO:GO:0019538 | GO:GO:0023014 | GO:GO:0038023 | GO:GO:0050896 | InterPro:IPR000014 | InterPro:IPR000700 |
| RefSeq:NP_565288.1 | RefSeq:NP_849928.1 | UniProt:O64511 | ProteinID:OAP09374.1 | InterPro:PAC | InterPro:PAS |
| InterPro:PAS-assoc_C | InterPro:PAS-like_dom_sf | PFAM:PF13426 | Symbol:PLP | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50112 | PFscan:PS50113 | PANTHER:PTHR45497 | SMART:SM00086 | SMART:SM00091 |
| SUPFAM:SSF55785 | TIGRFAMs:TIGR00229 | UniParc:UPI00000A9117 | SEG:seg | : | : |
Description
TLP1Protein TWIN LOV 1 [Source:UniProtKB/Swiss-Prot;Acc:O64511]
Coordinates
chr2:-:758693..761064
Molecular Weight (calculated)
44892.7 Da
IEP (calculated)
7.058
GRAVY (calculated)
-0.257
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTKSSESV FTEEEEEDSF SGRYTLWIKE ALEELPHNFT ITDPFISGHP IVFASLGFLK MTGYSREEVI GRNGKVFQGP KTNRRSIMEI REAIREERSV
101: QVSLLNYRKS GSPFWMLFHM CPVFGKDDGK VTNFVAVQVP ISGREHHRKK LRNVGDLSSD TSPTFGSCRR EVCFGNFVCQ DRALPVECDD DEQGLEDWEQ
201: CEASESEKLK ATEAINNVLS ILVHYSELSG RLVCGKRYCL RGVDCLSSSL VISLGRIKQS FVLTNPCLPD MPIIYASDAF LTLTGYKRQE VLGQNCRFLS
301: GVDTDSSVLY EMKECILKGQ SCTVQILNYS NRKDKSSFWN LLHISPVRNA SGKTAYFVGV QVEASCRNTE IKELRPETRQ LSVVGAVRVA VRSSLMVTC
101: QVSLLNYRKS GSPFWMLFHM CPVFGKDDGK VTNFVAVQVP ISGREHHRKK LRNVGDLSSD TSPTFGSCRR EVCFGNFVCQ DRALPVECDD DEQGLEDWEQ
201: CEASESEKLK ATEAINNVLS ILVHYSELSG RLVCGKRYCL RGVDCLSSSL VISLGRIKQS FVLTNPCLPD MPIIYASDAF LTLTGYKRQE VLGQNCRFLS
301: GVDTDSSVLY EMKECILKGQ SCTVQILNYS NRKDKSSFWN LLHISPVRNA SGKTAYFVGV QVEASCRNTE IKELRPETRQ LSVVGAVRVA VRSSLMVTC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.