Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58039 | Soybean | cytosol | 29.37 | 38.16 |
| KRH69365 | Soybean | cytosol | 55.39 | 37.72 |
| KRH74769 | Soybean | cytosol | 52.79 | 36.6 |
| VIT_01s0026g01590.t01 | Wine grape | nucleus | 38.66 | 26.2 |
| Bra024812.1-P | Field mustard | cytosol, nucleus, plastid | 37.92 | 26.09 |
| CDY03044 | Canola | nucleus | 37.55 | 25.9 |
| CDY45203 | Canola | cytosol, nucleus, plastid | 37.55 | 25.83 |
| AT2G02710.1 | Thale cress | nucleus | 36.06 | 24.31 |
| GSMUA_Achr5P06380_001 | Banana | nucleus | 34.2 | 23.53 |
| Solyc01g010480.2.1 | Tomato | cytosol | 32.71 | 22.86 |
| PGSC0003DMT400045475 | Potato | nucleus | 33.46 | 22.61 |
| PGSC0003DMT400068851 | Potato | nucleus | 32.34 | 22.54 |
| Solyc05g007020.2.1 | Tomato | nucleus | 33.09 | 22.36 |
| TraesCS3B01G129800.4 | Wheat | cytosol | 28.25 | 19.39 |
| TraesCS3A01G111100.2 | Wheat | cytosol | 28.25 | 19.29 |
| Os01t0186200-01 | Rice | cytosol | 28.25 | 19.24 |
| TraesCS3D01G113100.2 | Wheat | cytosol | 27.88 | 18.75 |
| KXG31655 | Sorghum | cytosol | 25.28 | 17.0 |
| Zm00001d039530_P001 | Maize | cytosol | 25.28 | 16.92 |
| HORVU3Hr1G020100.9 | Barley | mitochondrion | 26.39 | 14.82 |
Protein Annotations
| EMBL:ACUP02009980 | EnsemblPlants:KRH07406 | EnsemblPlantsGene:GLYMA_16G086400 | Gene3D:3.30.450.20 | PANTHER:PTHR45497 | ProteinID:KRH07406 |
| ProteinID:KRH07406.1 | SEG:seg | UniParc:UPI00023D69D1 | UniProt:I1MM79 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr16:-:10501228..10503123
Molecular Weight (calculated)
30611.9 Da
IEP (calculated)
8.832
GRAVY (calculated)
0.372
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFRVSPVFS SDGGAVVHFV VVQVPLQKKE GSEVRDFGFG CCRKEVCVDS LVEMITFVHW SNCSNMINCP SVWKWRDKSR VRRVMMRSEV LLLPWTVYFL
101: RLVCRKRSSI PDVGLLSTSL IISLGRIKQS FVLTNPHLPD MAIVYASDAF LNLTGFKVVT LYKLDQLQMN LLIFSHSSYT SNVICSLVFF NYYCLVKRVV
201: ADIVVDDLIN IRNSILVAYF VGVQIEDNNK NDDSHCLSPE KRQLSVVSVV KVAPLKLLIL CNLIKSIEY
101: RLVCRKRSSI PDVGLLSTSL IISLGRIKQS FVLTNPHLPD MAIVYASDAF LNLTGFKVVT LYKLDQLQMN LLIFSHSSYT SNVICSLVFF NYYCLVKRVV
201: ADIVVDDLIN IRNSILVAYF VGVQIEDNNK NDDSHCLSPE KRQLSVVSVV KVAPLKLLIL CNLIKSIEY
001: MSLTKSSESV FTEEEEEDSF SGRYTLWIKE ALEELPHNFT ITDPFISGHP IVFASLGFLK MTGYSREEVI GRNGKVFQGP KTNRRSIMEI REAIREERSV
101: QVSLLNYRKS GSPFWMLFHM CPVFGKDDGK VTNFVAVQVP ISGREHHRKK LRNVGDLSSD TSPTFGSCRR EVCFGNFVCQ DRALPVECDD DEQGLEDWEQ
201: CEASESEKLK ATEAINNVLS ILVHYSELSG RLVCGKRYCL RGVDCLSSSL VISLGRIKQS FVLTNPCLPD MPIIYASDAF LTLTGYKRQE VLGQNCRFLS
301: GVDTDSSVLY EMKECILKGQ SCTVQILNYR KDKSSFWNLL HISPVRNASG KTAYFVGVQV EASCRNTEIK ELRPETRQLS VVGAVRVAVR SSLMVTC
101: QVSLLNYRKS GSPFWMLFHM CPVFGKDDGK VTNFVAVQVP ISGREHHRKK LRNVGDLSSD TSPTFGSCRR EVCFGNFVCQ DRALPVECDD DEQGLEDWEQ
201: CEASESEKLK ATEAINNVLS ILVHYSELSG RLVCGKRYCL RGVDCLSSSL VISLGRIKQS FVLTNPCLPD MPIIYASDAF LTLTGYKRQE VLGQNCRFLS
301: GVDTDSSVLY EMKECILKGQ SCTVQILNYR KDKSSFWNLL HISPVRNASG KTAYFVGVQV EASCRNTEIK ELRPETRQLS VVGAVRVAVR SSLMVTC
Arabidopsis Description
TLP1Protein TWIN LOV 1 [Source:UniProtKB/Swiss-Prot;Acc:O64511]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.