Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 4
- mitochondrion 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89604 | Canola | peroxisome | 96.26 | 96.26 |
| CDX93112 | Canola | peroxisome | 96.01 | 96.01 |
| Bra013148.1-P | Field mustard | peroxisome | 96.01 | 96.01 |
| CDY37208 | Canola | peroxisome | 95.76 | 95.76 |
| Bra037207.1-P | Field mustard | peroxisome | 95.51 | 95.51 |
| CDX81443 | Canola | peroxisome | 95.51 | 95.51 |
| Solyc12g099930.1.1 | Tomato | nucleus, plastid | 88.03 | 88.03 |
| PGSC0003DMT400011851 | Potato | cytosol | 87.78 | 87.78 |
| KRH45948 | Soybean | peroxisome | 84.79 | 84.79 |
| KRG99049 | Soybean | peroxisome | 84.54 | 84.54 |
| TraesCS7B01G148000.1 | Wheat | peroxisome, plastid | 84.54 | 84.54 |
| Os08t0502700-01 | Rice | extracellular | 84.29 | 84.08 |
| GSMUA_Achr7P20440_001 | Banana | unclear | 84.04 | 84.04 |
| VIT_06s0009g03740.t01 | Wine grape | extracellular | 82.79 | 82.79 |
| GSMUA_Achr8P24400_001 | Banana | peroxisome | 73.82 | 82.45 |
| EES14284 | Sorghum | cytosol | 82.29 | 82.09 |
| Zm00001d031403_P001 | Maize | peroxisome | 43.39 | 80.93 |
| Zm00001d031349_P002 | Maize | plastid | 80.8 | 80.4 |
| Zm00001d031379_P001 | Maize | plastid | 77.81 | 80.0 |
| Zm00001d031364_P001 | Maize | cytosol, peroxisome, plasma membrane | 55.86 | 76.45 |
| Zm00001d031402_P001 | Maize | cytosol | 19.7 | 72.48 |
| KRH33429 | Soybean | cytosol, extracellular, peroxisome, plastid | 16.71 | 72.04 |
| HORVU7Hr1G049870.3 | Barley | plastid | 77.31 | 70.78 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 59.85 | 69.57 |
Protein Annotations
| KEGG:00440+2.6.1.37 | MapMan:1.3.3.2 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:4.1.2.1.3 | EntrezGene:815822 |
| UniProt:A0A178VX39 | ProteinID:AAD28669.1 | EMBL:AB048945 | ProteinID:AEC06227.1 | ProteinID:AEC06228.1 | EMBL:AF063901 |
| Symbol:AGT | EMBL:AK221418 | ProteinID:ANM62628.1 | ArrayExpress:AT2G13360 | EnsemblPlantsGene:AT2G13360 | RefSeq:AT2G13360 |
| TAIR:AT2G13360 | RefSeq:AT2G13360-TAIR-G | EnsemblPlants:AT2G13360.1 | TAIR:AT2G13360.1 | EMBL:AY096498 | EMBL:AY114010 |
| InterPro:Aminotrans_V_PyrdxlP_BS | InterPro:Aminotrans_V_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004760 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008453 | GO:GO:0008483 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009853 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0019265 | GO:GO:0048046 | GO:GO:0050281 | InterPro:IPR015421 | InterPro:IPR015422 | RefSeq:NP_001318216.1 |
| RefSeq:NP_178969.1 | RefSeq:NP_849951.1 | ProteinID:OAP09815.1 | PFAM:PF00266 | PIRSF:PIRSF000524 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00595 | PANTHER:PTHR21152 | PANTHER:PTHR21152:SF29 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major |
| UniProt:Q56YA5 | InterPro:SP_NH2Trfase/AEP_transaminase | SUPFAM:SSF53383 | UniParc:UPI0000043F44 | SEG:seg | : |
Description
AGT1Serine--glyoxylate aminotransferase [Source:UniProtKB/Swiss-Prot;Acc:Q56YA5]
Coordinates
chr2:-:5538740..5541409
Molecular Weight (calculated)
44210.5 Da
IEP (calculated)
7.945
GRAVY (calculated)
0.023
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYMYGPGRH HLFVPGPVNI PEPVIRAMNR NNEDYRSPAI PALTKTLLED VKKIFKTTSG TPFLFPTTGT GAWESALTNT LSPGDRIVSF LIGQFSLLWI
101: DQQKRLNFNV DVVESDWGQG ANLQVLASKL SQDENHTIKA ICIVHNETAT GVTNDISAVR TLLDHYKHPA LLLVDGVSSI CALDFRMDEW GVDVALTGSQ
201: KALSLPTGLG IVCASPKALE ATKTSKSLKV FFDWNDYLKF YKLGTYWPYT PSIQLLYGLR AALDLIFEEG LENIIARHAR LGKATRLAVE AWGLKNCTQK
301: EEWISNTVTA VMVPPHIDGS EIVRRAWQRY NLSLGLGLNK VAGKVFRIGH LGNVNELQLL GCLAGVEMIL KDVGYPVVMG SGVAAASTYL QHHIPLIPSR
401: I
101: DQQKRLNFNV DVVESDWGQG ANLQVLASKL SQDENHTIKA ICIVHNETAT GVTNDISAVR TLLDHYKHPA LLLVDGVSSI CALDFRMDEW GVDVALTGSQ
201: KALSLPTGLG IVCASPKALE ATKTSKSLKV FFDWNDYLKF YKLGTYWPYT PSIQLLYGLR AALDLIFEEG LENIIARHAR LGKATRLAVE AWGLKNCTQK
301: EEWISNTVTA VMVPPHIDGS EIVRRAWQRY NLSLGLGLNK VAGKVFRIGH LGNVNELQLL GCLAGVEMIL KDVGYPVVMG SGVAAASTYL QHHIPLIPSR
401: I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.