Factsheet for HORVU7Hr1G049870.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1
HORVU7Hr1G049870.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G13360.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166
AT2G13360.1	HORVU7Hr1G049870.3	AT2G13360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G148000.1	Wheat	peroxisome, plastid	82.19	89.78
Os08t0502700-01	Rice	extracellular	75.11	81.84
EES14284	Sorghum	cytosol	72.6	79.1
Solyc12g099930.1.1	Tomato	nucleus, plastid	72.37	79.05
PGSC0003DMT400011851	Potato	cytosol	72.37	79.05
Bra013148.1-P	Field mustard	peroxisome	72.15	78.8
CDX93112	Canola	peroxisome	72.15	78.8
CDX89604	Canola	peroxisome	71.92	78.55
CDY37208	Canola	peroxisome	71.92	78.55
Bra037207.1-P	Field mustard	peroxisome	71.69	78.3
CDX81443	Canola	peroxisome	71.69	78.3
AT2G13360.1	Thale cress	peroxisome	70.78	77.31
KRH45948	Soybean	peroxisome	70.32	76.81
GSMUA_Achr7P20440_001	Banana	unclear	69.63	76.06
KRG99049	Soybean	peroxisome	69.63	76.06
GSMUA_Achr8P24400_001	Banana	peroxisome	62.1	75.77
Zm00001d031349_P002	Maize	plastid	69.41	75.43
VIT_06s0009g03740.t01	Wine grape	extracellular	68.95	75.31
Zm00001d031379_P001	Maize	plastid	65.98	74.1
Zm00001d031402_P001	Maize	cytosol	17.81	71.56
Zm00001d031403_P001	Maize	peroxisome	34.7	70.7
Zm00001d031364_P001	Maize	cytosol, peroxisome, plasma membrane	45.89	68.6
KRH33429	Soybean	cytosol, extracellular, peroxisome, plastid	14.38	67.74
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	49.09	62.32

Protein Annotations

KEGG:00440+2.6.1.37	MapMan:1.3.3.2	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.2.1.3	UniProt:A0A287WFL7
InterPro:Aminotrans_V_PyrdxlP_BS	InterPro:Aminotrans_V_dom	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:HORVU7Hr1G049870	EnsemblPlants:HORVU7Hr1G049870.3
InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00266	PIRSF:PIRSF000524	ScanProsite:PS00595	PANTHER:PTHR21152
PANTHER:PTHR21152:SF29	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	InterPro:SP_NH2Trfase/AEP_transaminase	SUPFAM:SSF53383
UniParc:UPI000B4706A5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:176151991..176154910

Molecular Weight (calculated)

47951.6 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.151

Length

438 amino acids

Sequence
(BLAST)

001: MPVGHHASYI ASVHPILLSF ARIPPSPPLV TDGKSKMDYM NGPGRNHLFV PGPVNIPDQV IRAMSRQNED YRSPAIPALT KTLLEDVKKI FKTTTGTPFL
101: FPTTGTGAWE SALTNTLSPG DRIVSFSLGQ FSLLWIDQQQ RLGFSVDVVE SDWGYGADLG VLESKLRSDS QHTIKAICIV HNETATGVTN DLHAVRKLLD
201: AYRHPALLLV DGVSSICALD FRMDEWGVDV ALTGSQKALS LPTGLGIVCA SPKALEAAKT AKSVRVFFDW KDYLKFYKMG TYWPYTPSIQ LLYGLRAGLD
301: LLFEEGLDNV IKRHTRLGTA TRLAVAAWGL KNCTEKEENF SDTVTAVVVP PYIDSSEIVK HAWKRYNLSL GLGLNKVAGK VFRIGHLGHL NEVPATSGLP
401: RRGGDGAQGH RVPGEAWQRR GGRGGVPLEF HAPHPLQN

Best Arabidopsis Sequence Match ( AT2G13360.2 )
(BLAST)

001: MDYMYGPGRH HLFVPGPVNI PEPVIRAMNR NNEDYRSPAI PALTKTLLED VKKIFKTTSG TPFLFPTTGT GAWESALTNT LSPGDRIVSF LIGQFSLLWI
101: DQQKRLNFNV DVVESDWGQG ANLQVLASKL SQDENHTIKA ICIVHNETAT GVTNDISAVR TLLDHYKHPA LLLVDGVSSI CALDFRMDEW GVDVALTGSQ
201: KALSLPTGLG IVCASPKALE ATKTSKSLKV FFDWNDYLKF YKLGTYWPYT PSIQLLYGLR AALDLIFEEG LENIIARHAR LGKATRLAVE AWGLKNCTQK
301: EEWISNTVTA VMVPPHIDGS EIVRRAWQRY NLSLGLGLNK VAGKVFRIGH LGNVNELQLL GCLAGVEMIL KDVGYPVVMG SGVAAASTYL QHHIPLIPSR
401: I

Arabidopsis Description

AGT1Serine--glyoxylate aminotransferase [Source:UniProtKB/Swiss-Prot;Acc:Q56YA5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.