Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88939 | Canola | cytosol | 94.1 | 94.1 |
| CDY06117 | Canola | cytosol | 94.1 | 94.1 |
| Bra014633.1-P | Field mustard | cytosol | 93.88 | 93.88 |
| Bra007317.1-P | Field mustard | cytosol | 93.88 | 93.88 |
| CDY30993 | Canola | cytosol | 93.42 | 93.42 |
| CDX72053 | Canola | cytosol | 93.2 | 93.2 |
| PGSC0003DMT400076704 | Potato | cytosol | 82.99 | 83.56 |
| Solyc10g079880.1.1 | Tomato | cytosol, nucleus | 82.31 | 82.88 |
| Zm00001d029511_P001 | Maize | vacuole | 31.29 | 75.41 |
| GSMUA_Achr7P21330_001 | Banana | cytosol | 74.83 | 75.0 |
| KXG34696 | Sorghum | cytosol | 72.79 | 73.12 |
| Zm00001d005238_P001 | Maize | plasma membrane | 71.88 | 72.71 |
| Zm00001d029828_P001 | Maize | cytosol | 23.36 | 72.54 |
| Zm00001d019182_P001 | Maize | cytosol | 71.43 | 72.25 |
| Os07t0222300-01 | Rice | cytosol, plasma membrane | 68.93 | 69.25 |
| TraesCS5B01G260000.2 | Wheat | cytosol, golgi, unclear | 68.25 | 68.25 |
| TraesCS5D01G269200.1 | Wheat | cytosol | 68.25 | 68.25 |
| TraesCS5A01G261900.1 | Wheat | cytosol | 68.25 | 68.25 |
| Zm00001d040830_P001 | Maize | cytosol | 30.61 | 65.53 |
| Os07t0167000-01 | Rice | cytosol | 60.09 | 63.86 |
| HORVU5Hr1G072560.1 | Barley | cytosol | 67.57 | 63.4 |
| Os07t0503700-00 | Rice | cytosol, plasma membrane | 56.69 | 58.0 |
| Zm00001d020479_P005 | Maize | cytosol | 17.69 | 54.93 |
| Zm00001d029554_P001 | Maize | plasma membrane, plastid | 31.97 | 52.81 |
| Zm00001d014873_P001 | Maize | plasma membrane, plastid | 31.52 | 52.06 |
| Zm00001d051103_P004 | Maize | plasma membrane | 24.04 | 50.24 |
| Zm00001d010441_P001 | Maize | cytosol | 11.79 | 49.52 |
| Zm00001d020635_P001 | Maize | mitochondrion | 25.62 | 49.13 |
| Zm00001d051050_P001 | Maize | plasma membrane | 34.92 | 41.85 |
| Zm00001d031414_P001 | Maize | cytosol | 15.19 | 37.85 |
| Zm00001d020588_P001 | Maize | plasma membrane | 14.29 | 35.0 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:17.4.1.3.5 | EntrezGene:824896 | UniProt:A0A178VL03 | ProteinID:AEE79636.1 | EMBL:AF255679 |
| EMBL:AF285832 | ArrayExpress:AT3G57290 | EnsemblPlantsGene:AT3G57290 | RefSeq:AT3G57290 | TAIR:AT3G57290 | RefSeq:AT3G57290-TAIR-G |
| EnsemblPlants:AT3G57290.1 | TAIR:AT3G57290.1 | EMBL:AY039913 | EMBL:AY079357 | Unigene:At.24447 | ProteinID:CAB68135.1 |
| Symbol:EIF3E | GO:GO:0000003 | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005852 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006352 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006417 | GO:GO:0006446 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 | GO:GO:0009651 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016282 | GO:GO:0017148 |
| GO:GO:0019538 | GO:GO:0030371 | GO:GO:0031597 | GO:GO:0033290 | GO:GO:0045182 | GO:GO:0071540 |
| InterPro:IPR000717 | HAMAP:MF_03004 | RefSeq:NP_567047.1 | ProteinID:OAP06536.1 | InterPro:PCI_dom | PFAM:PF01399 |
| PFAM:PF09440 | PIRSF:PIRSF016255 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50250 | PANTHER:PTHR10317 | PANTHER:PTHR10317:SF0 | UniProt:Q9C5Z3 | SMART:SM00088 | SMART:SM00753 |
| SMART:SM01186 | SUPFAM:SSF46785 | UniParc:UPI000009C9B8 | InterPro:WH_DNA-bd_sf | InterPro:eIF3e | InterPro:eIF3e_N |
Description
TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
Coordinates
chr3:-:21196517..21199319
Molecular Weight (calculated)
51752.9 Da
IEP (calculated)
5.664
GRAVY (calculated)
-0.439
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.