Factsheet for Os07t0503700-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0123300-00
Os07t0124500-01
Os07t0490800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57290.1	Os07t0490800-01	AT1G02090.1	11029466
AT3G57290.1	Os02t0123300-00	AT3G56150.1	11029466
AT3G57290.1	Os07t0124500-01	AT3G56150.1	11029466

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0167000-01	Rice	cytosol	74.25	77.11
Os07t0222300-01	Rice	cytosol, plasma membrane	70.53	69.25
KXG34696	Sorghum	cytosol	68.21	66.97
TraesCS5D01G269200.1	Wheat	cytosol	66.13	64.63
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	66.13	64.63
TraesCS5A01G261900.1	Wheat	cytosol	66.13	64.63
GSMUA_Achr7P21330_001	Banana	cytosol	64.04	62.73
KRH33198	Soybean	endoplasmic reticulum	61.48	60.64
HORVU5Hr1G072560.1	Barley	cytosol	65.66	60.21
KRH72039	Soybean	endoplasmic reticulum	61.02	60.18
VIT_00s0252g00070.t01	Wine grape	cytosol	60.79	59.95
CDY19244	Canola	extracellular	6.03	59.09
Zm00001d010441_P001	Maize	cytosol	14.15	58.1
PGSC0003DMT400076704	Potato	cytosol	58.93	57.99
Solyc10g079880.1.1	Tomato	cytosol, nucleus	58.93	57.99
AT3G57290.1	Thale cress	cytosol	58.0	56.69
Bra007317.1-P	Field mustard	cytosol	57.77	56.46
CDY30993	Canola	cytosol	57.77	56.46
CDY06117	Canola	cytosol	57.77	56.46
CDX88939	Canola	cytosol	57.77	56.46
CDX72053	Canola	cytosol	57.77	56.46
Bra014633.1-P	Field mustard	cytosol	57.77	56.46
Bra034326.1-P	Field mustard	cytosol	22.04	41.3
Zm00001d020588_P001	Maize	plasma membrane	14.62	35.0
CDY70248	Canola	cytosol	22.97	33.45
CDY70454	Canola	mitochondrion	6.26	25.23
CDX79391	Canola	cytosol, extracellular, nucleus	8.82	17.12
CDY19243	Canola	cytosol	6.26	15.43

Protein Annotations

MapMan:17.4.1.3.5	UniProt:A0A0P0X6F9	ProteinID:BAT01660.1	GO:GO:0001732	GO:GO:0002183	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005852	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016282	GO:GO:0019538	GO:GO:0033290	GO:GO:0071540	InterPro:IPR000717	HAMAP:MF_03004
EnsemblPlantsGene:Os07g0503700	EnsemblPlants:Os07t0503700-00	InterPro:PCI_dom	PFAM:PF01399	PFAM:PF09440	PIRSF:PIRSF016255
PANTHER:PTHR10317	PANTHER:PTHR10317:SF0	SMART:SM00088	SMART:SM00753	SMART:SM01186	SUPFAM:SSF46785
UniParc:UPI000393B8F6	InterPro:WH_DNA-bd_sf	InterPro:eIF3e	InterPro:eIF3e_N	SEG:seg	:

Description

Similar to Eukaryotic initiation factor 3e. (Os07t0503700-00)

Coordinates

chr7:+:19053629..19055955

Molecular Weight (calculated)

49679.9 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.266

Length

431 amino acids

Sequence
(BLAST)

001: MAEHDLTARM AAHMNCHLVF PLLEFLQWRP GRVYAVEEIL QAKLRLLIQG TNMVDYAMDT HKLLHGDTDD DVVVPVPDDM VERRHEVVTR LGALAAPAAP
101: IVSALKNHHL GPDKEHNIRM LHERFQIGPD QIEALYQYAK FQFDCGNYPD AAENLHRYRA LCTSSERSLS AQWGKLSAEI LNNNWDVALE ELNCLKEMID
201: SKNSSSPLNQ LQNRIWLMHC SIFIFFNHGN GSYGIIDLFF QDKYLNAIQT DAPHLLRYLA AAIVVNRRRR NMLKELVKVI QQEQHSYKDP ITEFLECLYV
301: NHDFDGAQQK LIECEQVILN DPFLGKRIEE GNSITVPLRD EFLENARLLI FESYCRIHRM LSEKLKMSYN EAELWIMNLV SNSKLDAKID TASGTLIMTA
401: NHANIHQQFI ESLKNLDMRT FMLAKSTMEP A

Best Arabidopsis Sequence Match ( AT3G57290.1 )
(BLAST)

001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R

Arabidopsis Description

TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.