CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029511_P001	Maize	vacuole	63.64	15.3
CDX79391	Canola	cytosol, extracellular, nucleus	75.0	14.86
Zm00001d051103_P004	Maize	plasma membrane	68.18	14.22
Zm00001d029828_P001	Maize	cytosol	45.45	14.08
Zm00001d040830_P001	Maize	cytosol	63.64	13.59
Zm00001d014873_P001	Maize	plasma membrane, plastid	65.91	10.86
Zm00001d029554_P001	Maize	plasma membrane, plastid	65.91	10.86
Zm00001d031414_P001	Maize	cytosol	38.64	9.6
CDY70248	Canola	cytosol	59.09	8.78
Zm00001d051050_P001	Maize	plasma membrane	65.91	7.88
Os07t0167000-01	Rice	cytosol	70.45	7.47
Zm00001d005238_P001	Maize	plasma membrane	72.73	7.34
KXG34696	Sorghum	cytosol	72.73	7.29
GSMUA_Achr7P21330_001	Banana	cytosol	72.73	7.27
CDY30993	Canola	cytosol	72.73	7.26
CDY06117	Canola	cytosol	72.73	7.26
CDX88939	Canola	cytosol	72.73	7.26
Zm00001d019182_P001	Maize	cytosol	70.45	7.11
KRH72039	Soybean	endoplasmic reticulum	70.45	7.09
KRH33198	Soybean	endoplasmic reticulum	70.45	7.09
Os07t0222300-01	Rice	cytosol, plasma membrane	70.45	7.06
CDX72053	Canola	cytosol	70.45	7.03
TraesCS5D01G269200.1	Wheat	cytosol	68.18	6.8
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	68.18	6.8
TraesCS5A01G261900.1	Wheat	cytosol	68.18	6.8
VIT_00s0252g00070.t01	Wine grape	cytosol	65.91	6.64
HORVU5Hr1G072560.1	Barley	cytosol	68.18	6.38
Os07t0503700-00	Rice	cytosol, plasma membrane	59.09	6.03
Zm00001d010441_P001	Maize	cytosol	6.82	2.86
CDY70454	Canola	mitochondrion	6.82	2.8
Zm00001d020588_P001	Maize	plasma membrane	11.36	2.78
CDY19243	Canola	cytosol	9.09	2.29
Zm00001d020479_P005	Maize	cytosol	6.82	2.11
Zm00001d020635_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

MapMan:35.2	GO:A0A078G194	UniProt:A0A078G194	EnsemblPlants:CDY19244	ProteinID:CDY19244	ProteinID:CDY19244.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005852	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00006553001	PANTHER:PTHR10317	UniParc:UPI0004EE1502	InterPro:eIF3e	:	:

Description

BnaC05g14450DBnaC05g14450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G194]

Coordinates

chrLK032093:-:543980..544201

Molecular Weight (calculated)

4986.2 Da

IEP (calculated)

4.355

GRAVY (calculated)

0.441

Length

44 amino acids

Sequence
(BLAST)

1: MSALWGKLAS EILMQNWDIA LEELNRLKDI IDSKLLLGCS QILV

Best Arabidopsis Sequence Match ( AT3G57290.1 )
(BLAST)

001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R

Arabidopsis Description

TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.