CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70248	Canola	cytosol	44.86	16.22
CDX88939	Canola	cytosol	44.86	10.88
CDY30993	Canola	cytosol	44.86	10.88
Zm00001d040830_P001	Maize	cytosol	20.56	10.68
VIT_00s0252g00070.t01	Wine grape	cytosol	42.99	10.53
CDY06117	Canola	cytosol	42.99	10.43
CDX72053	Canola	cytosol	41.12	9.98
KRH33198	Soybean	endoplasmic reticulum	40.19	9.84
KRH72039	Soybean	endoplasmic reticulum	39.25	9.61
Zm00001d019182_P001	Maize	cytosol	38.32	9.4
KXG34696	Sorghum	cytosol	38.32	9.34
Zm00001d005238_P001	Maize	plasma membrane	36.45	8.94
Zm00001d020588_P001	Maize	plasma membrane	14.95	8.89
GSMUA_Achr7P21330_001	Banana	cytosol	36.45	8.86
TraesCS5A01G261900.1	Wheat	cytosol	35.51	8.62
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	35.51	8.62
TraesCS5D01G269200.1	Wheat	cytosol	35.51	8.62
Os07t0222300-01	Rice	cytosol, plasma membrane	32.71	7.97
HORVU5Hr1G072560.1	Barley	cytosol	33.64	7.66
Zm00001d051103_P004	Maize	plasma membrane	14.95	7.58
CDY19244	Canola	extracellular	2.8	6.82
Os07t0503700-00	Rice	cytosol, plasma membrane	25.23	6.26
Zm00001d029511_P001	Maize	vacuole	10.28	6.01
Zm00001d010441_P001	Maize	cytosol	5.61	5.71
CDY19243	Canola	cytosol	9.35	5.71
Zm00001d031414_P001	Maize	cytosol	9.35	5.65
Zm00001d029828_P001	Maize	cytosol	6.54	4.93
Zm00001d014873_P001	Maize	plasma membrane, plastid	11.21	4.49
Zm00001d029554_P001	Maize	plasma membrane, plastid	11.21	4.49
Zm00001d051050_P001	Maize	plasma membrane	14.95	4.35
Zm00001d020635_P001	Maize	mitochondrion	8.41	3.91
Os07t0167000-01	Rice	cytosol	12.15	3.13
CDX79391	Canola	cytosol, extracellular, nucleus	4.67	2.25
Zm00001d020479_P005	Maize	cytosol	2.8	2.11

Protein Annotations

EnsemblPlants:CDY70454	EnsemblPlantsGene:GSBRNA2T00003458001	Gene3D:3.90.1150.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR015422
InterPro:PyrdxlP-dep_Trfase_dom1	ProteinID:CDY70454	ProteinID:CDY70454.1	UniParc:UPI0004EEFF32	UniProt:A0A078JUJ1	MapMan:35.1

Description

BnaCnng68410DBnaCnng68410D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUJ1]

Coordinates

chrLK042166:+:2593..3131

Molecular Weight (calculated)

12409.1 Da

IEP (calculated)

9.439

GRAVY (calculated)

-0.519

Length

107 amino acids

Sequence
(BLAST)

001: MVNQAKMARY RHLIELLNKT NKSLHHTEDA PQDIIIYGGR AAPLVTFLLN PNVVQELRGD KQYNLQMLKE RYQVTRLNEG ITQHKLVPEE TVTVIDSRCG
101: EKFSVYK

Best Arabidopsis Sequence Match ( AT4G34139.1 )
(BLAST)

001: MAQEPNFTFT YQYYKLKDHP FLTNVSSSIN LSTSRSEDPP SFTAFFAISA NSLARFLLSS PTITSLTAPS TFSLLMKSPT TCIIFFTPTL TPNCSAPTGH
101: VTIGRPAATP SNNEFHPQCV KNPPIALCSS ISTCGAHPRI INPFPLVFSS NPSEDFAAKR VMSMVPWLPF LLTTQTKSCP DISKPAAISI SCSFLKLDMV
201: PKAM

Arabidopsis Description

SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.