Factsheet for Os07t0167000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0123300-00
Os07t0124500-01
Os07t0490800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57290.1	Os07t0490800-01	AT1G02090.1	11029466
AT3G57290.1	Os02t0123300-00	AT3G56150.1	11029466
AT3G57290.1	Os07t0124500-01	AT3G56150.1	11029466

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0503700-00	Rice	cytosol, plasma membrane	77.11	74.25
Os07t0222300-01	Rice	cytosol, plasma membrane	76.87	72.67
KXG34696	Sorghum	cytosol	76.14	71.98
CDY19244	Canola	extracellular	7.47	70.45
TraesCS5D01G269200.1	Wheat	cytosol	70.36	66.21
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	70.36	66.21
TraesCS5A01G261900.1	Wheat	cytosol	70.36	66.21
GSMUA_Achr7P21330_001	Banana	cytosol	68.67	64.77
KRH33198	Soybean	endoplasmic reticulum	67.47	64.07
KRH72039	Soybean	endoplasmic reticulum	66.99	63.62
Zm00001d010441_P001	Maize	cytosol	15.9	62.86
VIT_00s0252g00070.t01	Wine grape	cytosol	66.02	62.7
HORVU5Hr1G072560.1	Barley	cytosol	69.88	61.7
Solyc10g079880.1.1	Tomato	cytosol, nucleus	63.86	60.5
PGSC0003DMT400076704	Potato	cytosol	63.86	60.5
Bra007317.1-P	Field mustard	cytosol	64.1	60.32
CDY06117	Canola	cytosol	64.1	60.32
CDX88939	Canola	cytosol	64.1	60.32
Bra014633.1-P	Field mustard	cytosol	64.1	60.32
CDY30993	Canola	cytosol	63.86	60.09
CDX72053	Canola	cytosol	63.86	60.09
AT3G57290.1	Thale cress	cytosol	63.86	60.09
Bra034326.1-P	Field mustard	cytosol	21.2	38.26
Zm00001d020588_P001	Maize	plasma membrane	15.9	36.67
CDY70248	Canola	cytosol	22.41	31.42
CDX79391	Canola	cytosol, extracellular, nucleus	10.84	20.27
CDY19243	Canola	cytosol	6.75	16.0
CDY70454	Canola	mitochondrion	3.13	12.15

Protein Annotations

MapMan:17.4.1.3.5	EntrezGene:4342489	ProteinID:BAD30375.1	ProteinID:BAT00214.1	ProteinID:EAZ38814.1	GO:GO:0001732
GO:GO:0002183	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005852	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016282	GO:GO:0019538	GO:GO:0033290
GO:GO:0071540	InterPro:IPR000717	InterPro:IPR011990	HAMAP:MF_03004	EnsemblPlantsGene:Os07g0167000	EnsemblPlants:Os07t0167000-01
InterPro:PCI_dom	PFAM:PF01399	PFAM:PF09440	PIRSF:PIRSF016255	PFscan:PS50250	PANTHER:PTHR10317
PANTHER:PTHR10317:SF0	UniProt:Q69W36	SMART:SM00088	SMART:SM00753	SMART:SM01186	SUPFAM:SSF46785
SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000005E662	InterPro:WH_DNA-bd_sf	RefSeq:XP_015646641.1	InterPro:eIF3e
InterPro:eIF3e_N	:	:	:	:	:

Description

EUKARYOTIC INITIATION FACTOR 3ESimilar to Eukaryotic initiation factor 3e. (Os07t0167000-01);Similar to Eukaryotic initiation factor 3e. (Os07t0167000-02)

Coordinates

chr7:+:3595696..3599675

Molecular Weight (calculated)

48604.5 Da

IEP (calculated)

5.891

GRAVY (calculated)

-0.331

Length

415 amino acids

Sequence
(BLAST)

001: MAEHDLTARM AGHLDCHLVL PLLEFLQERH LYPEEEILEA KIRLLRGTNM VDYAMDIHKS RYGTDDVPED MVKRRAEVVS RLTSLGEAID NIHQNQQIGP
101: DQIETLYQYA KFQFDCGNYS FAAQYLHQYR ALCTNIERSL SALWGKLAAE ILMQNWDVAL EELNRLKEII DSKNFSSPLN QLQNRIWLMH WSIFIFYNHE
201: NGRNGIIDLF FQERYLNAIQ TNAPHLLRYL ATAVVVNKRR RNMLKELIKV IQQEQHSYKD PITEFLECLF VNYDFDGAQQ KLIECEEVIL NDPFLGKRIE
301: EGNSITVPLR DEFLENARLF IFETYCRIHR SIDIGMLSQK LNMRYDEGEL WIMNLVRNSK LDAKIDSVSG TLIMTTNHVN IHEQFIESLK NLNMRTSMLA
401: KNIVEPAQAM QQATR

Best Arabidopsis Sequence Match ( AT3G57290.1 )
(BLAST)

001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R

Arabidopsis Description

TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.