Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 3
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79391 | Canola | cytosol, extracellular, nucleus | 45.22 | 46.85 |
| CDY19243 | Canola | cytosol | 29.57 | 38.86 |
| Zm00001d040830_P001 | Maize | cytosol | 31.3 | 34.95 |
| Bra014633.1-P | Field mustard | cytosol | 58.7 | 30.61 |
| Bra007317.1-P | Field mustard | cytosol | 58.26 | 30.39 |
| Zm00001d029511_P001 | Maize | vacuole | 22.61 | 28.42 |
| VIT_00s0252g00070.t01 | Wine grape | cytosol | 53.91 | 28.38 |
| KRH33198 | Soybean | endoplasmic reticulum | 53.04 | 27.92 |
| KRH72039 | Soybean | endoplasmic reticulum | 52.17 | 27.46 |
| KXG34696 | Sorghum | cytosol | 48.7 | 25.51 |
| Zm00001d019182_P001 | Maize | cytosol | 48.26 | 25.46 |
| GSMUA_Achr7P21330_001 | Banana | cytosol | 48.26 | 25.23 |
| Zm00001d005238_P001 | Maize | plasma membrane | 47.39 | 25.0 |
| Zm00001d051103_P004 | Maize | plasma membrane | 21.74 | 23.7 |
| TraesCS5D01G269200.1 | Wheat | cytosol | 45.22 | 23.58 |
| TraesCS5B01G260000.2 | Wheat | cytosol, golgi, unclear | 45.22 | 23.58 |
| TraesCS5A01G261900.1 | Wheat | cytosol | 45.22 | 23.58 |
| Os07t0222300-01 | Rice | cytosol, plasma membrane | 44.35 | 23.23 |
| Os07t0503700-00 | Rice | cytosol, plasma membrane | 41.3 | 22.04 |
| HORVU5Hr1G072560.1 | Barley | cytosol | 44.35 | 21.7 |
| Os07t0167000-01 | Rice | cytosol | 38.26 | 21.2 |
| Zm00001d014873_P001 | Maize | plasma membrane, plastid | 23.91 | 20.6 |
| Zm00001d029554_P001 | Maize | plasma membrane, plastid | 23.91 | 20.6 |
| Zm00001d029828_P001 | Maize | cytosol | 11.74 | 19.01 |
| Zm00001d051050_P001 | Maize | plasma membrane | 27.83 | 17.39 |
| Zm00001d031414_P001 | Maize | cytosol | 13.04 | 16.95 |
| Zm00001d020635_P001 | Maize | mitochondrion | 15.22 | 15.22 |
| Zm00001d020588_P001 | Maize | plasma membrane | 11.3 | 14.44 |
| Zm00001d010441_P001 | Maize | cytosol | 5.65 | 12.38 |
| Zm00001d020479_P005 | Maize | cytosol | 3.48 | 5.63 |
Protein Annotations
Description
AT5G25820 (E=1e-036) | exostosin family protein
Coordinates
chrA04:-:11912319..11914394
Molecular Weight (calculated)
26637.8 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.550
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYRHLVFP ILEFLQEHQL YPDEQILKFK IELLNKTNMV DYAMDIHKSL DHTEDAPQDM EEAAALLVTF LLNPNAVQEL RGDKKYNLQM LKERYQIGPD
101: QIEALNQYAK FQFECGNYSA SEILMQNWDI ALEELNRLKD IIDSKAPSET RKHFSKTIRA LCNSDVKEGF VFGKDTSLPE TYVRYPKKPL SNIGGKSASK
201: RPTVAFFAGQ PDHGYVRPIL LSYWGEQQRS
101: QIEALNQYAK FQFECGNYSA SEILMQNWDI ALEELNRLKD IIDSKAPSET RKHFSKTIRA LCNSDVKEGF VFGKDTSLPE TYVRYPKKPL SNIGGKSASK
201: RPTVAFFAGQ PDHGYVRPIL LSYWGEQQRS
001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R
Arabidopsis Description
TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.