CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79391	Canola	cytosol, extracellular, nucleus	48.0	37.84
Bra034326.1-P	Field mustard	cytosol	38.86	29.57
Zm00001d010441_P001	Maize	cytosol	7.43	12.38
Zm00001d029511_P001	Maize	vacuole	10.86	10.38
Zm00001d029828_P001	Maize	cytosol	8.0	9.86
Zm00001d020588_P001	Maize	plasma membrane	9.71	9.44
CDY70454	Canola	mitochondrion	5.71	9.35
Zm00001d020479_P005	Maize	cytosol	7.43	9.15
CDY19244	Canola	extracellular	2.29	9.09
Zm00001d014873_P001	Maize	plasma membrane, plastid	12.0	7.87
Zm00001d029554_P001	Maize	plasma membrane, plastid	12.0	7.87
KRH33198	Soybean	endoplasmic reticulum	18.86	7.55
KRH72039	Soybean	endoplasmic reticulum	18.86	7.55
Os07t0167000-01	Rice	cytosol	16.0	6.75
Zm00001d019182_P001	Maize	cytosol	16.57	6.65
VIT_00s0252g00070.t01	Wine grape	cytosol	16.57	6.64
KXG34696	Sorghum	cytosol	16.57	6.61
GSMUA_Achr7P21330_001	Banana	cytosol	16.57	6.59
Zm00001d005238_P001	Maize	plasma membrane	16.0	6.42
Os07t0222300-01	Rice	cytosol, plasma membrane	16.0	6.38
CDX72053	Canola	cytosol	16.0	6.35
CDY30993	Canola	cytosol	16.0	6.35
CDY06117	Canola	cytosol	16.0	6.35
CDX88939	Canola	cytosol	16.0	6.35
Zm00001d040830_P001	Maize	cytosol	7.43	6.31
Os07t0503700-00	Rice	cytosol, plasma membrane	15.43	6.26
Zm00001d020635_P001	Maize	mitochondrion	8.0	6.09
TraesCS5A01G261900.1	Wheat	cytosol	14.86	5.9
TraesCS5D01G269200.1	Wheat	cytosol	14.86	5.9
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	14.86	5.9
CDY70248	Canola	cytosol	9.71	5.74
Zm00001d051103_P004	Maize	plasma membrane	6.86	5.69
HORVU5Hr1G072560.1	Barley	cytosol	14.86	5.53
Zm00001d051050_P001	Maize	plasma membrane	10.29	4.89
Zm00001d031414_P001	Maize	cytosol	4.57	4.52

Protein Annotations

EnsemblPlants:CDY19243	EnsemblPlantsGene:GSBRNA2T00006552001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	InterPro:Exostosin	PANTHER:PTHR11062	PANTHER:PTHR11062:SF108	PFAM:PF03016
ProteinID:CDY19243	ProteinID:CDY19243.1	UniParc:UPI0004EDE999	UniProt:A0A078G3G2	MapMan:35.1	:

Description

BnaC05g14440DBnaC05g14440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3G2]

Coordinates

chrLK032093:-:542773..543890

Molecular Weight (calculated)

20573.8 Da

IEP (calculated)

10.165

GRAVY (calculated)

-0.448

Length

175 amino acids

Sequence
(BLAST)

001: MMILSLSTKA HLFYLPFSSQ MLEETLYVKN SHRHRNLIKY LKDYIDFIST KYPFWNRTSG ADHFLAACHD WAPSETRKHF SKTIRALCNS DVKEGFVFGN
101: DTSLPETYVR DPKKPLTFFA GQPDHGYVRP ILLSYWGNNK DPDLKIFGKL LRSKRNKNYL QFMKTSKLFS MVVFQ

Best Arabidopsis Sequence Match ( AT4G32790.1 )
(BLAST)

001: MLNLWLREHL VYVCHQQNLV AKFRSQKAMK LLRFAGLVFI FITTFQFVNI RYYGGDIFSL SSQDKFPVSI DVSTEPVSTL SGPERLNSSS SRSVEVDEEE
101: STGLKEDHVI GFDKNDTVQG HDSFVEDVKD KETLDLLPGT KSSSNESYEK IVEDADIAFE NIRKMEILES KSDPSVDNLS SEVKKFMNVS NSGVVSITEM
201: MNLLHQSRTS HVSLKVKRSS TIDHELLYAR TQIENPPLIE NDPLLHTPLY WNLSMFKRSY ELMEKKLKVY VYREGKRPVL HKPVLKGIYA SEGWFMKQLK
301: SSRTFVTKDP RKAHLFYLPF SSKMLEETLY VPGSHSDKNL IQFLKNYLDM ISSKYSFWNK TGGSDHFLVA CHDWAPSETR QYMAKCIRAL CNSDVSEGFV
401: FGKDVALPET TILVPRRPLR ALGGKPVSQR QILAFFAGGM HGYLRPLLLQ NWGGNRDPDM KIFSEIPKSK GKKSYMEYMK SSKYCICPKG HEVNSPRVVE
501: ALFYECVPVI ISDNFVPPFF EVLNWESFAV FVLEKDIPDL KNILVSITEE RYREMQMRVK MVQKHFLWHS KPERFDIFHM ILHSIWYNRV FQI

Arabidopsis Description

Exostosin family protein [Source:UniProtKB/TrEMBL;Acc:O65522]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.