CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19244	Canola	extracellular	8.78	59.09
CDY70454	Canola	mitochondrion	16.22	44.86
Zm00001d040830_P001	Maize	cytosol	25.0	35.92
CDX88939	Canola	cytosol	49.32	33.11
CDY30993	Canola	cytosol	49.32	33.11
CDY06117	Canola	cytosol	48.99	32.88
CDX72053	Canola	cytosol	48.65	32.65
VIT_00s0252g00070.t01	Wine grape	cytosol	46.28	31.35
KRH33198	Soybean	endoplasmic reticulum	45.27	30.66
KRH72039	Soybean	endoplasmic reticulum	44.59	30.21
Zm00001d029511_P001	Maize	vacuole	17.57	28.42
KXG34696	Sorghum	cytosol	41.89	28.25
Zm00001d019182_P001	Maize	cytosol	41.55	28.21
Zm00001d005238_P001	Maize	plasma membrane	41.22	27.98
GSMUA_Achr7P21330_001	Banana	cytosol	40.88	27.5
TraesCS5A01G261900.1	Wheat	cytosol	38.51	25.85
TraesCS5B01G260000.2	Wheat	cytosol, golgi, unclear	38.51	25.85
TraesCS5D01G269200.1	Wheat	cytosol	38.51	25.85
Zm00001d051103_P004	Maize	plasma membrane	17.91	25.12
Os07t0222300-01	Rice	cytosol, plasma membrane	37.16	25.06
HORVU5Hr1G072560.1	Barley	cytosol	37.84	23.83
Os07t0503700-00	Rice	cytosol, plasma membrane	33.45	22.97
Os07t0167000-01	Rice	cytosol	31.42	22.41
Zm00001d014873_P001	Maize	plasma membrane, plastid	18.58	20.6
Zm00001d029554_P001	Maize	plasma membrane, plastid	18.58	20.6
Zm00001d029828_P001	Maize	cytosol	9.8	20.42
Zm00001d051050_P001	Maize	plasma membrane	21.96	17.66
CDX79391	Canola	cytosol, extracellular, nucleus	12.84	17.12
Zm00001d031414_P001	Maize	cytosol	9.46	15.82
Zm00001d020635_P001	Maize	mitochondrion	11.82	15.22
Zm00001d010441_P001	Maize	cytosol	4.73	13.33
Zm00001d020588_P001	Maize	plasma membrane	8.11	13.33
CDY19243	Canola	cytosol	5.74	9.71
Zm00001d020479_P005	Maize	cytosol	3.38	7.04

Protein Annotations

MapMan:35.1	UniProt:A0A078JRQ1	EnsemblPlants:CDY70248	ProteinID:CDY70248	ProteinID:CDY70248.1	InterPro:Exostosin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00097613001	PFAM:PF03016	PFAM:PF09440	PANTHER:PTHR11062	PANTHER:PTHR11062:SF108	SMART:SM01186
UniParc:UPI0004EDCB94	InterPro:eIF3e_N	:	:	:	:

Description

BnaAnng33080DBnaAnng33080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRQ1]

Coordinates

chrLK041588:-:774..2894

Molecular Weight (calculated)

34483.2 Da

IEP (calculated)

7.695

GRAVY (calculated)

-0.524

Length

296 amino acids

Sequence
(BLAST)

001: MARYRHLVFP ILEFLQEHQL YPDEQILKFK IELLNKTNMV DYAMDIHKSL HHTEDAPQDM EEAAALLVTF LLNPNAVQEL RGDKKYNLQM LKERYQIGPD
101: QIEALNQYAK FQFECGNYSA SEILMQNWDI ALEELNRLKD IIDSKLLLGC RSHDSGVSRL MLEETLYVKN SHRHRNLIKY LKDYIDFIST KYPFWNRTSG
201: ADHFLAACHD WAPSETRKHF SKTIRALCNS DVKEGFVFGK DTSLPETYVR YPKKPLSNIG GKSASKRPTV AFFAGQPDHG YVRPILLSYW GEQQRS

Best Arabidopsis Sequence Match ( AT3G57290.1 )
(BLAST)

001: MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL
101: LNPNAVQELR ADKQYNLQML KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL MQNWDIALEE LNRLKEIIDS
201: KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301: YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV
401: IMEPTQPNVH EQLINHTKGL SGRTYKLVNQ LLEHTQAQAT R

Arabidopsis Description

TIF3E1Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.