Factsheet for AT4G00850.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G01160.2	Thale cress	cytosol, nucleus, vacuole	57.85	56.33
Zm00001d023767_P001	Maize	cytosol	36.77	45.05
Zm00001d041753_P001	Maize	cytosol, extracellular, nucleus	36.77	44.81
EES17040	Sorghum	cytosol	37.22	44.62
GSMUA_Achr2P21910_001	Banana	cytosol	34.98	44.32
TraesCS5B01G114600.1	Wheat	cytosol	35.87	43.24
TraesCS5A01G107700.1	Wheat	cytosol	35.87	43.24
TraesCS5D01G116800.1	Wheat	cytosol	35.43	42.7
HORVU5Hr1G028870.1	Barley	cytosol	35.43	42.47
PGSC0003DMT400008338	Potato	cytosol, nucleus, plastid	36.77	41.62
Os12t0496900-01	Rice	cytosol	34.53	41.62
EES10114	Sorghum	cytosol, extracellular, nucleus	39.01	40.65
Os11t0615200-01	Rice	extracellular	37.22	40.49
TraesCS4B01G158300.1	Wheat	cytosol	34.98	40.0
Solyc03g082480.2.1	Tomato	nucleus	35.43	39.7
Zm00001d048833_P001	Maize	extracellular	37.67	38.18
GSMUA_Achr11P...	Banana	cytosol	37.67	38.01
TraesCS4A01G151200.1	Wheat	cytosol	33.18	37.0
GSMUA_AchrUn_...	Banana	cytosol	31.84	34.8
AT5G28640.1	Thale cress	nucleus	32.29	34.29
KRH53598	Soybean	nucleus	25.11	28.72

Protein Annotations

MapMan:15.5.52.2	EntrezGene:827995	ProteinID:AAB62864.1	ProteinID:AEE81945.1	EMBL:AF378866	ArrayExpress:AT4G00850
EnsemblPlantsGene:AT4G00850	RefSeq:AT4G00850	TAIR:AT4G00850	RefSeq:AT4G00850-TAIR-G	EnsemblPlants:AT4G00850.1	TAIR:AT4G00850.1
EMBL:AY052732	EMBL:AY102641	ProteinID:CAB80894.1	Symbol:GIF3	GO:GO:0003674	GO:GO:0003713
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008283	GO:GO:0009058	GO:GO:0009987	GO:GO:0048366	GO:GO:1903506	GO:GO:1903508
RefSeq:NP_567194.1	PFAM:PF05030	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR23107
PANTHER:PTHR23107:SF0	UniProt:Q93VH6	InterPro:SS18_fam	UniParc:UPI00000A9CD4	SEG:seg	:

Description

GIF3GRF1-interacting factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH6]

Coordinates

chr4:+:357345..359337

Molecular Weight (calculated)

23771.3 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.632

Length

223 amino acids

Sequence
(BLAST)

001: MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ KNLMYLAAIA DAQPQPPAAT LTSGAMTPQA MAPNPSSMQP
101: PPSYFMQQHQ AVGMAQQIPP GIFPPRGPLQ FGSPHQFLDP QQQLHQQAMQ GHMGIRPMGL NNNNGLQHQM HHHETALAAN NAGPNDASGG GKPDGTNMSQ
201: SGADGQGGSA ARHGGGDAKT EGK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.