Factsheet for Os11t0615200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10114	Sorghum	cytosol, extracellular, nucleus	77.56	74.3
TraesCS4B01G158300.1	Wheat	cytosol	65.37	68.72
TraesCS4A01G151200.1	Wheat	cytosol	63.9	65.5
Zm00001d048833_P001	Maize	extracellular	69.76	65.0
Os12t0496900-01	Rice	cytosol	53.66	59.46
GSMUA_AchrUn_...	Banana	cytosol	47.8	48.04
GSMUA_Achr2P21910_001	Banana	cytosol	40.98	47.73
KRH47827	Soybean	cytosol	47.32	45.54
GSMUA_Achr11P...	Banana	cytosol	48.29	44.8
KRH06396	Soybean	cytosol	44.88	43.81
VIT_15s0048g02770.t01	Wine grape	nucleus	46.34	42.79
Bra033281.1-P	Field mustard	nucleus	40.49	40.29
CDX90014	Canola	cytosol	40.49	40.29
Solyc10g009280.2.1	Tomato	nucleus	39.02	40.0
PGSC0003DMT400014095	Potato	cytosol, nucleus, vacuole	39.02	40.0
CDY15196	Canola	nucleus	38.54	38.54
CDY37994	Canola	cytosol	36.59	38.46
PGSC0003DMT400008338	Potato	cytosol, nucleus, plastid	36.1	37.56
CDY32441	Canola	cytosol	37.07	37.44
Bra032623.1-P	Field mustard	cytosol	37.07	37.44
AT4G00850.1	Thale cress	cytosol, extracellular, nucleus	40.49	37.22
Solyc03g082480.2.1	Tomato	nucleus	36.1	37.19
AT1G01160.2	Thale cress	cytosol, nucleus, vacuole	40.0	35.81
KRH44608	Soybean	cytosol	24.39	30.67
Os03t0733600-01	Rice	nucleus	32.2	29.07
KRH53598	Soybean	nucleus	27.32	28.72
CDY62048	Canola	cytosol, plastid	13.66	24.14

Protein Annotations

MapMan:15.5.52.2	EntrezGene:4350919	ProteinID:ABA94692.1	EMBL:AK241971	ProteinID:BAF28638.1	ProteinID:BAT14854.1
ProteinID:EAZ19095.1	GO:GO:0003674	GO:GO:0003713	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:1903506	GO:GO:1903508	EnsemblPlantsGene:Os11g0615200	EnsemblPlants:Os11t0615200-01
PFAM:PF05030	PANTHER:PTHR23107	PANTHER:PTHR23107:SF8	UniProt:Q2R176	InterPro:SS18_fam	UniParc:UPI0000681E81
RefSeq:XP_015615240.1	SEG:seg	:	:	:	:

Description

GRF-interacting factor 1SSXT family protein. (Os11t0615200-01)

Coordinates

chr11:-:23913819..23917177

Molecular Weight (calculated)

21611.6 Da

IEP (calculated)

4.679

GRAVY (calculated)

-0.580

Length

205 amino acids

Sequence
(BLAST)

001: MQQQMAMPAG AAAAAVPPAA GITTEQIQKY LDENKQLILA ILENQNLGKL AECAQYQAQL QKNLLYLAAI ADAQPPQNPG SRPQMMQPGA TPGAGHYMSQ
101: VPMFPPRTPL TPQQMQEQQQ QQLQQQQAQA LAFPGQMLMR PGTVNGMQSI PVADPARAAD LQTAAPGSVD GRGNKQDATS EPSGTESHKS AGADNDAGGD
201: IAEKS

Best Arabidopsis Sequence Match ( AT4G00850.1 )
(BLAST)

001: MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ KNLMYLAAIA DAQPQPPAAT LTSGAMTPQA MAPNPSSMQP
101: PPSYFMQQHQ AVGMAQQIPP GIFPPRGPLQ FGSPHQFLDP QQQLHQQAMQ GHMGIRPMGL NNNNGLQHQM HHHETALAAN NAGPNDASGG GKPDGTNMSQ
201: SGADGQGGSA ARHGGGDAKT EGK

Arabidopsis Description

GIF3GRF1-interacting factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH6]
SUBAcon: [extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.