CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06396	Soybean	cytosol	49.69	38.57
KRH47827	Soybean	cytosol	50.31	38.5
VIT_15s0048g02770.t01	Wine grape	nucleus	49.08	36.04
Zm00001d023767_P001	Maize	cytosol	34.97	31.32
Solyc10g009280.2.1	Tomato	nucleus	37.42	30.5
PGSC0003DMT400014095	Potato	cytosol, nucleus, vacuole	37.42	30.5
Zm00001d041753_P001	Maize	cytosol, extracellular, nucleus	33.74	30.05
EES17040	Sorghum	cytosol	33.74	29.57
TraesCS5D01G116800.1	Wheat	cytosol	33.13	29.19
TraesCS5B01G114600.1	Wheat	cytosol	33.13	29.19
TraesCS5A01G107700.1	Wheat	cytosol	33.13	29.19
HORVU5Hr1G028870.1	Barley	cytosol	33.13	29.03
TraesCS4B01G158300.1	Wheat	cytosol	34.36	28.72
TraesCS4A01G151200.1	Wheat	cytosol	34.36	28.0
GSMUA_Achr2P21910_001	Banana	cytosol	30.06	27.84
Os12t0496900-01	Rice	cytosol	31.29	27.57
GSMUA_AchrUn_...	Banana	cytosol	32.52	25.98
GSMUA_Achr11P...	Banana	cytosol	34.97	25.79
EES10114	Sorghum	cytosol, extracellular, nucleus	32.52	24.77
Os11t0615200-01	Rice	extracellular	30.67	24.39
KRG92707	Soybean	nucleus	31.29	24.06
KRG97010	Soybean	nucleus	30.06	23.33
KRH34114	Soybean	nucleus	30.06	23.11
Zm00001d048833_P001	Maize	extracellular	30.67	22.73
KRH53598	Soybean	nucleus	24.54	20.51
KRH68767	Soybean	cytosol	29.45	18.68

Protein Annotations

EMBL:ACUP02004943	EnsemblPlants:KRH44608	EnsemblPlantsGene:GLYMA_08G221100	GO:GO:0003674	GO:GO:0003713	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:1903506	GO:GO:1903508
InterPro:SS18_fam	PANTHER:PTHR23107	PANTHER:PTHR23107:SF0	PFAM:PF05030	ProteinID:KRH44608	ProteinID:KRH44608.1
SEG:seg	UniParc:UPI0002958B31	UniProt:K7L846	MapMan:15.5.52.2	:	:

Description

hypothetical protein

Coordinates

chr8:+:17964322..17965504

Molecular Weight (calculated)

18009.5 Da

IEP (calculated)

5.462

GRAVY (calculated)

-0.591

Length

163 amino acids

Sequence
(BLAST)

001: MACYDTLQYL DENKKLIVAI MENMKLGKID KCAEYQEKIQ QNLMYLATIA DLQHSQTLIM PPQMIPPPSR MQPEYYMQHP QGVAMVQQQG IFPPNMQLQF
101: GNPQQQLHQH AIQGQITRIG NGTYPMHSEN VLEGGHSGGS TSTASPNNAC GGSMQGTSED GDG

Best Arabidopsis Sequence Match ( AT4G00850.1 )
(BLAST)

001: MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ KNLMYLAAIA DAQPQPPAAT LTSGAMTPQA MAPNPSSMQP
101: PPSYFMQQHQ AVGMAQQIPP GIFPPRGPLQ FGSPHQFLDP QQQLHQQAMQ GHMGIRPMGL NNNNGLQHQM HHHETALAAN NAGPNDASGG GKPDGTNMSQ
201: SGADGQGGSA ARHGGGDAKT EGK

Arabidopsis Description

GIF3GRF1-interacting factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH6]
SUBAcon: [extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.