Factsheet for Zm00001d023767_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17040	Sorghum	cytosol	93.96	91.94
Zm00001d041753_P001	Maize	cytosol, extracellular, nucleus	81.32	80.87
TraesCS5B01G114600.1	Wheat	cytosol	79.12	77.84
TraesCS5A01G107700.1	Wheat	cytosol	78.57	77.3
TraesCS5D01G116800.1	Wheat	cytosol	77.47	76.22
HORVU5Hr1G028870.1	Barley	cytosol	76.37	74.73
Os12t0496900-01	Rice	cytosol	69.78	68.65
Zm00001d048833_P001	Maize	extracellular	62.09	51.36
GSMUA_Achr11P...	Banana	cytosol	54.4	44.8
GSMUA_AchrUn_...	Banana	cytosol	50.0	44.61
GSMUA_Achr2P21910_001	Banana	cytosol	42.86	44.32
KRH47827	Soybean	cytosol	51.1	43.66
KRH06396	Soybean	cytosol	50.0	43.33
VIT_15s0048g02770.t01	Wine grape	nucleus	50.55	41.44
Solyc10g009280.2.1	Tomato	nucleus	43.96	40.0
PGSC0003DMT400014095	Potato	cytosol, nucleus, vacuole	42.86	39.0
CDY32441	Canola	cytosol	43.41	38.92
Bra032623.1-P	Field mustard	cytosol	43.41	38.92
PGSC0003DMT400008338	Potato	cytosol, nucleus, plastid	40.66	37.56
CDY15196	Canola	nucleus	41.76	37.07
CDX90014	Canola	cytosol	41.76	36.89
Bra033281.1-P	Field mustard	nucleus	41.76	36.89
AT4G00850.1	Thale cress	cytosol, extracellular, nucleus	45.05	36.77
CDY37994	Canola	cytosol	38.46	35.9
Solyc03g082480.2.1	Tomato	nucleus	38.46	35.18
KRH44608	Soybean	cytosol	31.32	34.97
AT1G01160.2	Thale cress	cytosol, nucleus, vacuole	40.66	32.31
KRH53598	Soybean	nucleus	31.32	29.23
Zm00001d033905_P001	Maize	nucleus	31.87	25.55
CDY62048	Canola	cytosol, plastid	12.64	19.83

Protein Annotations

EnsemblPlants:Zm00001d023767_P001	EnsemblPlants:Zm00001d023767_T001	EnsemblPlantsGene:Zm00001d023767	GO:GO:0003674	GO:GO:0003713	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:1903506	GO:GO:1903508
InterPro:SS18_fam	PANTHER:PTHR23107	PANTHER:PTHR23107:SF8	PFAM:PF05030	ProteinID:AQK39991.1	SEG:seg
UniParc:UPI0000F065F2	UniProt:A0A1D6IVG3	MapMan:15.5.52.2	:	:	:

Description

GRF1-interacting factor 3

Coordinates

chr10:+:19457326..19463711

Molecular Weight (calculated)

19437.2 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.575

Length

182 amino acids

Sequence
(BLAST)

001: MQQPMHMQPQ APAITPAAGI STEQIQKYLD ENKQLILAIL ENQNLGKLAE CAQYQSQLQK NLLYLAAIAD AQPQTAVSRP QMAPPGGSPG VGQYMSQVPM
101: FPPRTPLTPQ QMQEQQLQQQ QAQLLNFSGQ MVARPGMVNG MAQSMQAQLP PGVNKQDAGG VASEPSGTES HRSTGGDDGG SD

Best Arabidopsis Sequence Match ( AT1G01160.1 )
(BLAST)

001: MQQQQSPQMF PMVPSIPPAN NITTEQIQKY LDENKKLIMA IMENQNLGKL AECAQYQALL QKNLMYLAAI ADAQPPPPTP GPSPSTAVAA QMATPHSGMQ
101: PPSYFMQHPQ ASPAGIFAPR GPLQFGSPLQ FQDPQQQQQI HQQAMQGHMG IRPMGMTNNG MQHAMQQPET GLGGNVGLRG GKQDGADGQG KDDGK

Arabidopsis Description

GIF2GRF1-interacting factor 2 [Source:UniProtKB/TrEMBL;Acc:F4HQJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.