Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37994 | Canola | cytosol | 59.39 | 69.74 |
| Bra032623.1-P | Field mustard | cytosol | 58.95 | 66.5 |
| CDY32441 | Canola | cytosol | 58.95 | 66.5 |
| Bra033281.1-P | Field mustard | nucleus | 58.95 | 65.53 |
| CDX90014 | Canola | cytosol | 58.95 | 65.53 |
| CDY15196 | Canola | nucleus | 57.64 | 64.39 |
| CDY62048 | Canola | cytosol, plastid | 30.57 | 60.34 |
| AT4G00850.1 | Thale cress | cytosol, extracellular, nucleus | 56.33 | 57.85 |
| Zm00001d023767_P001 | Maize | cytosol | 32.31 | 40.66 |
| Os11t0615200-01 | Rice | extracellular | 35.81 | 40.0 |
| EES17040 | Sorghum | cytosol | 32.31 | 39.78 |
| GSMUA_Achr2P21910_001 | Banana | cytosol | 30.57 | 39.77 |
| Os12t0496900-01 | Rice | cytosol | 31.88 | 39.46 |
| Zm00001d041753_P001 | Maize | cytosol, extracellular, nucleus | 31.0 | 38.8 |
| EES10114 | Sorghum | cytosol, extracellular, nucleus | 35.81 | 38.32 |
| TraesCS5A01G107700.1 | Wheat | cytosol | 30.57 | 37.84 |
| TraesCS5B01G114600.1 | Wheat | cytosol | 30.57 | 37.84 |
| TraesCS5D01G116800.1 | Wheat | cytosol | 30.13 | 37.3 |
| HORVU5Hr1G028870.1 | Barley | cytosol | 29.69 | 36.56 |
| PGSC0003DMT400008338 | Potato | cytosol, nucleus, plastid | 31.44 | 36.55 |
| TraesCS4A01G151200.1 | Wheat | cytosol | 31.88 | 36.5 |
| TraesCS4B01G158300.1 | Wheat | cytosol | 30.57 | 35.9 |
| Solyc03g082480.2.1 | Tomato | nucleus | 31.0 | 35.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.0 | 34.8 |
| Zm00001d048833_P001 | Maize | extracellular | 33.19 | 34.55 |
| GSMUA_Achr11P... | Banana | cytosol | 32.31 | 33.48 |
| AT5G28640.1 | Thale cress | nucleus | 29.69 | 32.38 |
| KRH53598 | Soybean | nucleus | 20.96 | 24.62 |
Protein Annotations
| MapMan:15.5.52.2 | EntrezGene:839278 | ProteinID:AEE27248.1 | ArrayExpress:AT1G01160 | EnsemblPlantsGene:AT1G01160 | RefSeq:AT1G01160 |
| TAIR:AT1G01160 | RefSeq:AT1G01160-TAIR-G | EnsemblPlants:AT1G01160.2 | TAIR:AT1G01160.2 | Unigene:At.11894 | UniProt:F4HQJ3 |
| Symbol:GIF2 | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008283 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0048366 | GO:GO:1903506 |
| GO:GO:1903508 | RefSeq:NP_001154298.1 | PFAM:PF05030 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23107 | PANTHER:PTHR23107:SF0 | InterPro:SS18_fam |
| UniParc:UPI0001A7B25D | SEG:seg | : | : | : | : |
Description
GIF2GRF1-interacting factor 2 [Source:UniProtKB/TrEMBL;Acc:F4HQJ3]
Coordinates
chr1:+:72357..74096
Molecular Weight (calculated)
24884.0 Da
IEP (calculated)
5.979
GRAVY (calculated)
-0.495
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQQSPQMF PMVPSIPPAN NITTEQIQKM LGGSGNFESG FQEWTLKLDA CLMLLFCTFS WLDYLDENKK LIMAIMENQN LGKLAECAQY QALLQKNLMY
101: LAAIADAQPP PPTPGPSPST AVAAQMATPH SGMQPPSYFM QHPQASPAGI FAPRGPLQFG SPLQFQDPQQ QQQIHQQAMQ GHMGIRPMGM TNNGMQHAMQ
201: QPETGLGGNV GLRGGKQDGA DGQGKDDGK
101: LAAIADAQPP PPTPGPSPST AVAAQMATPH SGMQPPSYFM QHPQASPAGI FAPRGPLQFG SPLQFQDPQQ QQQIHQQAMQ GHMGIRPMGM TNNGMQHAMQ
201: QPETGLGGNV GLRGGKQDGA DGQGKDDGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.