Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37994 | Canola | cytosol | 96.55 | 57.44 |
| CDY32441 | Canola | cytosol | 86.21 | 49.26 |
| CDX90014 | Canola | cytosol | 74.14 | 41.75 |
| CDY15196 | Canola | nucleus | 71.55 | 40.49 |
| AT1G01160.2 | Thale cress | cytosol, nucleus, vacuole | 60.34 | 30.57 |
| GSMUA_Achr2P21910_001 | Banana | cytosol | 25.0 | 16.48 |
| PGSC0003DMT400008338 | Potato | cytosol, nucleus, plastid | 24.14 | 14.21 |
| EES10114 | Sorghum | cytosol, extracellular, nucleus | 25.86 | 14.02 |
| Os11t0615200-01 | Rice | extracellular | 24.14 | 13.66 |
| Solyc03g082480.2.1 | Tomato | nucleus | 22.41 | 13.07 |
| Zm00001d023767_P001 | Maize | cytosol | 19.83 | 12.64 |
| TraesCS4A01G151200.1 | Wheat | cytosol | 20.69 | 12.0 |
| EES17040 | Sorghum | cytosol | 18.97 | 11.83 |
| CDY57020 | Canola | nucleus | 20.69 | 11.82 |
| CDY00027 | Canola | nucleus | 20.69 | 11.82 |
| KRH53598 | Soybean | nucleus | 19.83 | 11.79 |
| CDY33883 | Canola | nucleus | 20.69 | 11.71 |
| Zm00001d041753_P001 | Maize | cytosol, extracellular, nucleus | 18.1 | 11.48 |
| TraesCS5D01G116800.1 | Wheat | cytosol | 18.1 | 11.35 |
| GSMUA_Achr11P... | Banana | cytosol | 21.55 | 11.31 |
| TraesCS4B01G158300.1 | Wheat | cytosol | 18.97 | 11.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.83 | 11.27 |
| Zm00001d048833_P001 | Maize | extracellular | 20.69 | 10.91 |
| TraesCS5A01G107700.1 | Wheat | cytosol | 17.24 | 10.81 |
| TraesCS5B01G114600.1 | Wheat | cytosol | 17.24 | 10.81 |
| Os12t0496900-01 | Rice | cytosol | 17.24 | 10.81 |
| HORVU5Hr1G028870.1 | Barley | cytosol | 17.24 | 10.75 |
| CDY05600 | Canola | nucleus | 18.1 | 10.19 |
| CDX86202 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY62048 | EnsemblPlantsGene:GSBRNA2T00035883001 | ProteinID:CDY62048 | ProteinID:CDY62048.1 | SEG:seg | UniParc:UPI0004EEE3B4 |
| UniProt:A0A078JCP4 | MapMan:35.2 | : | : | : | : |
Description
BnaC03g76860DBnaC03g76860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCP4]
Coordinates
chrLK034087:+:13969..14634
Molecular Weight (calculated)
12371.6 Da
IEP (calculated)
8.002
GRAVY (calculated)
-1.079
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAPHPGMQP PSYFMQHPQA SGMAQQAPPA GIFPPRGPLQ FGSPHQLQDP QQQHMHQQAM QGHMGMRPMG INNNNGMQHQ MQQQQPETSL GGSAANVGLR
101: GGKQDGADGQ GKDDGK
101: GGKQDGADGQ GKDDGK
001: MQQQQSPQMF PMVPSIPPAN NITTEQIQKM LGGSGNFESG FQEWTLKLDA CLMLLFCTFS WLDYLDENKK LIMAIMENQN LGKLAECAQY QALLQKNLMY
101: LAAIADAQPP PPTPGPSPST AVAAQMATPH SGMQPPSYFM QHPQASPAGI FAPRGPLQFG SPLQFQDPQQ QQQIHQQAMQ GHMGIRPMGM TNNGMQHAMQ
201: QPETGLGGNV GLRGGKQDGA DGQGKDDGK
101: LAAIADAQPP PPTPGPSPST AVAAQMATPH SGMQPPSYFM QHPQASPAGI FAPRGPLQFG SPLQFQDPQQ QQQIHQQAMQ GHMGIRPMGM TNNGMQHAMQ
201: QPETGLGGNV GLRGGKQDGA DGQGKDDGK
Arabidopsis Description
GIF2GRF1-interacting factor 2 [Source:UniProtKB/TrEMBL;Acc:F4HQJ3]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.