CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06396	Soybean	cytosol	88.73	90.0
VIT_15s0048g02770.t01	Wine grape	nucleus	77.46	74.32
PGSC0003DMT400014095	Potato	cytosol, nucleus, vacuole	58.69	62.5
Solyc10g009280.2.1	Tomato	nucleus	53.99	57.5
EES17040	Sorghum	cytosol	45.07	51.61
TraesCS5D01G116800.1	Wheat	cytosol	44.6	51.35
TraesCS5B01G114600.1	Wheat	cytosol	44.6	51.35
Zm00001d023767_P001	Maize	cytosol	43.66	51.1
TraesCS5A01G107700.1	Wheat	cytosol	44.13	50.81
KRH44608	Soybean	cytosol	38.5	50.31
Zm00001d041753_P001	Maize	cytosol, extracellular, nucleus	43.19	50.27
HORVU5Hr1G028870.1	Barley	cytosol	43.66	50.0
GSMUA_Achr2P21910_001	Banana	cytosol	39.91	48.3
TraesCS4B01G158300.1	Wheat	cytosol	44.13	48.21
Os12t0496900-01	Rice	cytosol	41.78	48.11
Os11t0615200-01	Rice	extracellular	45.54	47.32
TraesCS4A01G151200.1	Wheat	cytosol	43.66	46.5
EES10114	Sorghum	cytosol, extracellular, nucleus	46.48	46.26
GSMUA_AchrUn_...	Banana	cytosol	43.19	45.1
GSMUA_Achr11P...	Banana	cytosol	46.01	44.34
Zm00001d048833_P001	Maize	extracellular	44.13	42.73
KRH34114	Soybean	nucleus	35.68	35.85
KRG92707	Soybean	nucleus	35.68	35.85
KRG97010	Soybean	nucleus	33.8	34.29
KRH53598	Soybean	nucleus	28.64	31.28
KRH68767	Soybean	cytosol	30.05	24.9

Protein Annotations

EntrezGene:100794665	MapMan:15.5.52.2	EMBL:ACUP02004171	EnsemblPlantsGene:GLYMA_07G051300	GO:GO:0003674	GO:GO:0003713
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:1903506
GO:GO:1903508	UniProt:I1KHR3	EnsemblPlants:KRH47827	ProteinID:KRH47827	ProteinID:KRH47827.1	ProteinID:KRH47828.1
ProteinID:KRH47829.1	ProteinID:KRH47830.1	ProteinID:KRH47831.1	PFAM:PF05030	PANTHER:PTHR23107	PANTHER:PTHR23107:SF0
InterPro:SS18_fam	UniParc:UPI0000F065F8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:4426134..4430143

Molecular Weight (calculated)

22575.8 Da

IEP (calculated)

5.833

GRAVY (calculated)

-0.716

Length

213 amino acids

Sequence
(BLAST)

001: MQQTPPMIPM MPSFPPTNIT TEQIQKYLDE NKKLILAILD NQNLGKLAEC AQYQAQLQKN LMYLAAIADA QPQTPAMPPQ MAPHPAMQPG FYMQHPQAAA
101: AAMAQQQQGM FPQKMPLQFG NPHQMQEQQQ QLHQQAIQGQ MGLRPGDINN GMHPMHSEAA LGGGNSGGPP SATGPNDARG GSKQDASEAG TAGGDGQGSS
201: AAAHNSGDGE EAK

Best Arabidopsis Sequence Match ( AT4G00850.1 )
(BLAST)

001: MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ KNLMYLAAIA DAQPQPPAAT LTSGAMTPQA MAPNPSSMQP
101: PPSYFMQQHQ AVGMAQQIPP GIFPPRGPLQ FGSPHQFLDP QQQLHQQAMQ GHMGIRPMGL NNNNGLQHQM HHHETALAAN NAGPNDASGG GKPDGTNMSQ
201: SGADGQGGSA ARHGGGDAKT EGK

Arabidopsis Description

GIF3GRF1-interacting factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH6]
SUBAcon: [extracellular,cytosol,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.