Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70951 | Canola | cytosol | 88.06 | 88.64 |
| CDX88834 | Canola | cytosol | 88.06 | 88.06 |
| Bra017440.1-P | Field mustard | cytosol | 34.52 | 76.43 |
| CDY04094 | Canola | cytosol | 34.52 | 76.43 |
| Bra006585.1-P | Field mustard | cytosol | 87.74 | 67.83 |
| HORVU6Hr1G042090.3 | Barley | cytosol | 26.13 | 66.94 |
| CDX87889 | Canola | cytosol | 51.29 | 64.9 |
| VIT_04s0008g02290.t01 | Wine grape | cytosol | 60.32 | 63.82 |
| KRH05327 | Soybean | cytosol, mitochondrion, nucleus | 64.19 | 63.58 |
| VIT_04s0008g02310.t01 | Wine grape | cytosol | 17.74 | 62.5 |
| PGSC0003DMT400019033 | Potato | cytosol | 62.26 | 62.06 |
| Solyc08g067290.2.1 | Tomato | cytosol | 62.26 | 61.86 |
| GSMUA_Achr8P24580_001 | Banana | cytosol, mitochondrion, nucleus | 57.42 | 53.94 |
| EER98955 | Sorghum | cytosol | 52.58 | 50.31 |
| Zm00001d005795_P002 | Maize | cytosol | 51.94 | 49.69 |
| TraesCS5B01G214500.2 | Wheat | cytosol | 51.29 | 49.23 |
| TraesCS5A01G216000.1 | Wheat | cytosol | 50.97 | 48.92 |
| TraesCS5D01G223800.1 | Wheat | cytosol | 50.97 | 48.92 |
| HORVU5Hr1G062970.1 | Barley | cytosol | 50.97 | 48.92 |
| KRH15708 | Soybean | cytosol, nucleus, plastid | 51.61 | 47.9 |
| Os09t0434200-01 | Rice | mitochondrion | 48.71 | 44.94 |
| GSMUA_Achr4P09670_001 | Banana | mitochondrion | 32.9 | 40.64 |
| AT1G68180.1 | Thale cress | mitochondrion | 14.52 | 19.15 |
Protein Annotations
| MapMan:11.1.2.3 | Gene3D:3.30.40.10 | EntrezGene:832215 | UniProt:A0A178URR2 | ProteinID:AED92903.1 | EMBL:AF296834 |
| Symbol:AIP2 | EMBL:AJ251087 | ArrayExpress:AT5G20910 | EnsemblPlantsGene:AT5G20910 | RefSeq:AT5G20910 | TAIR:AT5G20910 |
| RefSeq:AT5G20910-TAIR-G | EnsemblPlants:AT5G20910.1 | TAIR:AT5G20910.1 | EMBL:AY081329 | EMBL:BT000238 | ncoils:Coil |
| EMBL:DQ059130 | GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009788 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0046872 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_197591.1 | ProteinID:OAO96323.1 | PFAM:PF13639 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50089 | PANTHER:PTHR44679 | UniProt:Q8RXD3 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI000004E9BB | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
AIP2E3 ubiquitin-protein ligase AIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD3]
Coordinates
chr5:-:7092512..7094503
Molecular Weight (calculated)
34809.1 Da
IEP (calculated)
4.713
GRAVY (calculated)
-0.551
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDASSSPSPS EESLKLELDD LQKQLNKKLR FEASVCSIHN LLRDHYSSSS PSLRKQFYIV VSRVATVLKT RYTATGFWVA GLSLFEEAER LVSDASEKKH
101: LKSCVAQAKE QLSEVDNQPT ESSQGYLFEG HLTVDREPPQ PQWLVQQNLM SAFASIVGGE SSNGPTENTI GETANLMQEL INGLDMIIPD ILDDGGPPRA
201: PPASKEVVEK LPVIIFTEEL LKKFGAEAEC CICKENLVIG DKMQELPCKH TFHPPCLKPW LDEHNSCPIC RHELPTDDQK YENWKEREKE AEEERKGAEN
301: AVRGGEYMYV
101: LKSCVAQAKE QLSEVDNQPT ESSQGYLFEG HLTVDREPPQ PQWLVQQNLM SAFASIVGGE SSNGPTENTI GETANLMQEL INGLDMIIPD ILDDGGPPRA
201: PPASKEVVEK LPVIIFTEEL LKKFGAEAEC CICKENLVIG DKMQELPCKH TFHPPCLKPW LDEHNSCPIC RHELPTDDQK YENWKEREKE AEEERKGAEN
301: AVRGGEYMYV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.