Factsheet for Bra026315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G27690.1	Thale cress	cytosol	95.71	95.71
CDY19034	Canola	cytosol, endoplasmic reticulum	95.05	92.01
CDY55345	Canola	endoplasmic reticulum	98.02	91.95
Bra003049.1-P	Field mustard	cytosol	89.44	89.74
Solyc04g050240.2.1	Tomato	plastid	86.14	86.71
KRH62711	Soybean	endoplasmic reticulum	86.14	86.42
KRH56246	Soybean	endoplasmic reticulum	85.81	86.09
Bra022659.1-P	Field mustard	cytosol	89.77	79.3
Zm00001d023738_P001	Maize	extracellular, plasma membrane	77.89	77.63
EES16015	Sorghum	cytosol	77.89	77.63
HORVU4Hr1G031010.1	Barley	cytosol	77.23	76.97
TraesCS4A01G164600.2	Wheat	cytosol	76.9	76.64
TraesCS4D01G148600.1	Wheat	cytosol, golgi, unclear	76.9	76.64
TraesCSU01G067300.1	Wheat	cytosol	72.94	76.47
Zm00001d007296_P001	Maize	cytosol, extracellular	76.57	76.32
OQU83889	Sorghum	cytosol	53.8	76.17
GSMUA_Achr5P05770_001	Banana	cytosol	78.88	75.87
Os11t0629200-01	Rice	cytosol, plasma membrane	74.92	74.67
Os12t0500700-01	Rice	plasma membrane	75.25	74.51
GSMUA_Achr5P23810_001	Banana	golgi	76.57	72.27
VIT_16s0098g01270.t01	Wine grape	endoplasmic reticulum, vacuole	86.47	69.87
Os03t0679100-01	Rice	cytosol	12.21	63.79

Protein Annotations

EnsemblPlants:Bra026315.1	EnsemblPlants:Bra026315.1-P	EnsemblPlantsGene:Bra026315	Gene3D:2.60.40.640	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:Arrestin_C	InterPro:IPR014752	InterPro:Vps26-related	PANTHER:PTHR12233
PANTHER:PTHR12233:SF12	PFAM:PF03643	UniParc:UPI0002545922	UniProt:M4EC06	MapMan:22.5.5.3.3	:

Description

AT4G27690 (E=3e-170) VPS26B | VPS26B (VACUOLAR PROTEIN SORTING 26B)

Coordinates

chrA01:+:10070013..10072034

Molecular Weight (calculated)

35187.4 Da

IEP (calculated)

8.017

GRAVY (calculated)

-0.450

Length

303 amino acids

Sequence
(BLAST)

001: MNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFQSQETLSG KVCVEPYQGK KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VRELDVPGDI
101: YDRKTYPFEF PTVEMPYETY NGVNVRLRYV LKLTVTRGYA GSIVEYQEFM VRNYAPPPPI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKMKNMDLE IRRRESTGAG ANTHVETETL GKFELMDGTP VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKED
301: ASS

Best Arabidopsis Sequence Match ( AT4G27690.1 )
(BLAST)

001: MNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFHSQDTISG KVCIEPYQGK KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VRELDVPGEI
101: YERKTYPFEF PTVEMPYETY NGVNVRLRYV LKVTVTRGYA GSILEYQELV VRNYAPLPDI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKMKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGTP VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKED
301: ASS

Arabidopsis Description

VPS26BVPS26B [Source:UniProtKB/TrEMBL;Acc:A0A178UZ41]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.