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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 4
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023738_P001 Maize extracellular, plasma membrane 83.49 86.51
EES16015 Sorghum cytosol 83.17 86.18
Solyc04g050240.2.1 Tomato plastid 81.59 85.38
TraesCSU01G067300.1 Wheat cytosol 76.83 83.74
HORVU4Hr1G031010.1 Barley cytosol 80.63 83.55
Zm00001d007296_P001 Maize cytosol, extracellular 80.63 83.55
TraesCS4D01G148600.1 Wheat cytosol, golgi, unclear 80.63 83.55
TraesCS4A01G164600.2 Wheat cytosol 80.63 83.55
KRH56246 Soybean endoplasmic reticulum 79.37 82.78
KRH62711 Soybean endoplasmic reticulum 79.37 82.78
GSMUA_Achr5P23810_001 Banana golgi 84.13 82.55
OQU83889 Sorghum cytosol 55.24 81.31
Os11t0629200-01 Rice cytosol, plasma membrane 77.78 80.59
Os12t0500700-01 Rice plasma membrane 77.78 80.07
AT5G53530.1 Thale cress cytosol 76.51 79.8
Bra003049.1-P Field mustard cytosol 76.51 79.8
CDY72159 Canola cytosol 36.83 78.91
AT4G27690.1 Thale cress cytosol 75.87 78.88
Bra026315.1-P Field mustard cytosol 75.87 78.88
CDY19034 Canola cytosol, endoplasmic reticulum 74.6 75.08
CDY55345 Canola endoplasmic reticulum 76.83 74.92
CDY28831 Canola cytosol 75.56 74.14
Os03t0679100-01 Rice cytosol 13.33 72.41
VIT_16s0098g01270.t01 Wine grape endoplasmic reticulum, vacuole 82.86 69.6
Bra022659.1-P Field mustard cytosol 75.56 69.39
CDY14373 Canola cytosol, plastid 67.3 61.27
CDX96231 Canola endoplasmic reticulum, extracellular, plasma membrane 75.87 57.45
Protein Annotations
EnsemblPlants:GSMUA_Achr5P05770_001EnsemblPlants:GSMUA_Achr5T05770_001EnsemblPlantsGene:GSMUA_Achr5G05770_001Gene3D:2.60.40.640GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987InterPro:Arrestin_CInterPro:IPR014752InterPro:Vps26-relatedPANTHER:PTHR12233
PANTHER:PTHR12233:SF12PFAM:PF03643UniParc:UPI0002957694UniProt:M0SW06MapMan:22.5.5.3.3:
Description
Vacuolar protein sorting-associated protein 26 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05770_001]
Coordinates
chr5:+:4287337..4295187
Molecular Weight (calculated)
36854.5 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.262
Length
315 amino acids
Sequence
(BLAST)
001: MFCCFDILIS PYIIQNYIIG AFKPPCNITI SFADGKTRKK ASIKKENGQT AMVPLFQSLE NIVGEVSIEP VQGKKIEHTG VKIELLGQIE LYFDRGNFYD
101: FTSLVRELDI PGDIYERKTF PFEFSSVEMP YESYNGINVR LRYILKVTIS RNYVSNIVEY QDFWVRNYTP APTINNSIKM EVGIEDCLHI EFEYNKSKYH
201: LKDVIIGKIY FLLVRIKIKN MELEIRRRES TGSGPNTYVE TETLAKFELM DGAPVRGESI PIRLFLSPYE LTPTYRNINN KFSVKYFLNL VLVDEEDRRY
301: FKQQEITIYR LQETS
Best Arabidopsis Sequence Match ( AT5G53530.1 )
(BLAST)
001: MNYLLGAFKP ACNISITFTD GKNRKQVPTK KDNGQIVMNP LFQSQETIAG KINIEPYQGK KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VREIDVPGEI
101: YERKTYPFEF SSVEMPYETY NGVNVRLRYV LKVTVTRGYA GSIVEYQDFV VRNYVPLPPI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKIKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGAP VRGESIPVRV FLTPYDLTPT HKNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKEE
301: TS
Arabidopsis Description
VPS26AVacuolar protein sorting-associated protein 26A [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.