CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
endoplasmic reticulum 4
extracellular 3
golgi 3
plasma membrane 3
vacuole 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026315.1-P	Field mustard	cytosol	91.95	98.02
AT4G27690.1	Thale cress	cytosol	90.4	96.37
CDY19034	Canola	cytosol, endoplasmic reticulum	92.26	95.21
CDY72159	Canola	cytosol	40.56	89.12
KRH62711	Soybean	endoplasmic reticulum	81.42	87.09
KRH56246	Soybean	endoplasmic reticulum	81.11	86.75
Solyc04g050240.2.1	Tomato	plastid	80.5	86.38
CDY28831	Canola	cytosol	85.14	85.67
EES16015	Sorghum	cytosol	73.99	78.62
Zm00001d023738_P001	Maize	extracellular, plasma membrane	73.99	78.62
HORVU4Hr1G031010.1	Barley	cytosol	73.37	77.96
TraesCS4D01G148600.1	Wheat	cytosol, golgi, unclear	73.06	77.63
TraesCS4A01G164600.2	Wheat	cytosol	73.06	77.63
OQU83889	Sorghum	cytosol	51.39	77.57
TraesCSU01G067300.1	Wheat	cytosol	69.35	77.51
Zm00001d007296_P001	Maize	cytosol, extracellular	72.76	77.3
GSMUA_Achr5P05770_001	Banana	cytosol	74.92	76.83
Os11t0629200-01	Rice	cytosol, plasma membrane	70.59	75.0
Os12t0500700-01	Rice	plasma membrane	70.9	74.84
GSMUA_Achr5P23810_001	Banana	golgi	73.37	73.83
VIT_16s0098g01270.t01	Wine grape	endoplasmic reticulum, vacuole	82.35	70.93
CDY14373	Canola	cytosol, plastid	73.37	68.5
CDX96231	Canola	endoplasmic reticulum, extracellular, plasma membrane	85.14	66.11
Os03t0679100-01	Rice	cytosol	11.76	65.52

Protein Annotations

Gene3D:2.60.40.640	MapMan:22.5.5.3.3	UniProt:A0A078J0T2	InterPro:Arrestin_C	EnsemblPlants:CDY55345	ProteinID:CDY55345
ProteinID:CDY55345.1	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00016695001
InterPro:IPR014752	InterPro:Ig_E-set	PFAM:PF03643	PANTHER:PTHR12233	PANTHER:PTHR12233:SF12	SUPFAM:SSF81296
UniParc:UPI0004EF3ACC	InterPro:Vps26-related	:	:	:	:

Description

BnaAnng13820DBnaAnng13820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0T2]

Coordinates

chrLK033394:+:46054..48464

Molecular Weight (calculated)

37480.2 Da

IEP (calculated)

7.938

GRAVY (calculated)

-0.362

Length

323 amino acids

Sequence
(BLAST)

001: MWALCGLGFY SVDSLVISTW RNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFQSQETLSG KVCIEPYQGK KVEHNGVKVE LLGQIEMYFD
101: RGNFYDFTSL VRELDVPGDI YERKTYPFEF PTVEMPYETY NGVNVRLRYV LKVTVTRGYA GSIVEYHEFM VRNYAPPPPI NNSIKMEVGI EDCLHIEFEY
201: NKSKYHLKDV ILGKIYFLLV RIKMKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGTP VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD
301: EEDRRYFKQQ EITLYRLKED ASS

Best Arabidopsis Sequence Match ( AT4G27690.1 )
(BLAST)

001: MNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFHSQDTISG KVCIEPYQGK KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VRELDVPGEI
101: YERKTYPFEF PTVEMPYETY NGVNVRLRYV LKVTVTRGYA GSILEYQELV VRNYAPLPDI NNSIKMEVGI EDCLHIEFEY NKSKYHLKDV ILGKIYFLLV
201: RIKMKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGTP VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKED
301: ASS

Arabidopsis Description

VPS26BVPS26B [Source:UniProtKB/TrEMBL;Acc:A0A178UZ41]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.