Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016979.1-P | Field mustard | nucleus | 58.96 | 67.77 |
| CDY06973 | Canola | nucleus | 60.69 | 64.62 |
| Zm00001d050601_P001 | Maize | nucleus | 19.94 | 31.8 |
| Zm00001d016658_P001 | Maize | nucleus | 19.65 | 31.34 |
| AT2G40630.1 | Thale cress | nucleus | 44.22 | 28.6 |
| CDX98827 | Canola | nucleus | 28.03 | 27.09 |
| CDY14124 | Canola | nucleus | 29.77 | 25.25 |
| Zm00001d043415_P001 | Maize | cytosol | 2.89 | 25.0 |
| Zm00001d053987_P003 | Maize | nucleus | 34.97 | 21.68 |
| Zm00001d015148_P002 | Maize | nucleus | 34.1 | 21.07 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 28.03 | 20.38 |
| CDX70166 | Canola | nucleus | 28.03 | 20.04 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 32.37 | 19.96 |
| OQU84307 | Sorghum | nucleus | 31.79 | 19.54 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 31.5 | 19.39 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 31.5 | 19.39 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 30.92 | 19.07 |
| Os02t0132200-00 | Rice | plastid | 31.79 | 17.13 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 26.3 | 16.98 |
Protein Annotations
| EnsemblPlants:CDX93166 | EnsemblPlantsGene:GSBRNA2T00155097001 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | ProteinID:CDX93166 | ProteinID:CDX93166.1 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EE3850 | MapMan:35.2 | : | : |
Description
BnaC04g47300D
Coordinates
chrLK031875:-:18067..20104
Molecular Weight (calculated)
38732.8 Da
IEP (calculated)
7.241
GRAVY (calculated)
-0.634
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFFLLLPQI LLSCRNWFHG LSSLSLWVFQ LSGEKRGNED GSEEKDESDV VLAKDDDRLV TNALPETRTV KDVTNCETRG GVHVDEWMEM KRNGYLSGPL
101: GGPVASRPRK RKKRRGGDDS SKVPNKKKDQ HVVVAAPPSG LLTWLKPGII RDVRSKEEVY SSLEALIRDS AREDRALDSK VSDHAISLTN TEQAKLLAVE
201: AATIASQWLE FLHQDLRERL SAVKESRKRV DDTLKAELPL LVSSSKESTS GDVSLDKDVT EAHRMKWSAK FDEFKKRLHD EEIDLDSTLN HVKDTQSRCN
301: EGLRQMNEAS LGKDGTSQET NLAVQAAAAS IFSTCRYLLS KMKPPT
101: GGPVASRPRK RKKRRGGDDS SKVPNKKKDQ HVVVAAPPSG LLTWLKPGII RDVRSKEEVY SSLEALIRDS AREDRALDSK VSDHAISLTN TEQAKLLAVE
201: AATIASQWLE FLHQDLRERL SAVKESRKRV DDTLKAELPL LVSSSKESTS GDVSLDKDVT EAHRMKWSAK FDEFKKRLHD EEIDLDSTLN HVKDTQSRCN
301: EGLRQMNEAS LGKDGTSQET NLAVQAAAAS IFSTCRYLLS KMKPPT
001: MEEQRGISSG VVSEPASNSV ISGEKRNGNG LDEKDELGSK RVKVPDLASD AKTSSLQSHG NSNSVQQPNL SSEKLSKVSK VLVAPDAEGI RRVVRENDVL
101: SKDIKPSSTV ETRTYLPKAK SISTDDNRRV VNSGKQALLE NHTVKTDDSK CRVVKNISLL KPRETTESVV SQRGAAEPSV SVPVGDKVSP FQMCSSADGS
201: LGESDSMRRW REMKRNGFLS GPLGGVAAPT STVVTTPVEV PAPKQQKNKR RGGESLKKKN DVPKKEQQLV DRFANVTAPS GLLTELNPGI INHVRTKKQV
301: CSIIEALIRS SNDDATTRER HGDFNVRDAI REDRALAFKL PSTGVSDNAI SITNPEQATS LAVEAATVAS QWLEFLQQDL SGRLSAVQDS RNRVQNILTT
401: ELPLLASSRE SSSNQANSLE MVTTNTSGDA SSDKAATETH QKRWTAKFDQ INKALYDEQR DLERSLNQVK EMQSRCNHGL RQMEEYSPFS SQSSDSSFGK
501: DGNQETSMAV QAAAASIFST CSFLLSMMKP PPTGS
101: SKDIKPSSTV ETRTYLPKAK SISTDDNRRV VNSGKQALLE NHTVKTDDSK CRVVKNISLL KPRETTESVV SQRGAAEPSV SVPVGDKVSP FQMCSSADGS
201: LGESDSMRRW REMKRNGFLS GPLGGVAAPT STVVTTPVEV PAPKQQKNKR RGGESLKKKN DVPKKEQQLV DRFANVTAPS GLLTELNPGI INHVRTKKQV
301: CSIIEALIRS SNDDATTRER HGDFNVRDAI REDRALAFKL PSTGVSDNAI SITNPEQATS LAVEAATVAS QWLEFLQQDL SGRLSAVQDS RNRVQNILTT
401: ELPLLASSRE SSSNQANSLE MVTTNTSGDA SSDKAATETH QKRWTAKFDQ INKALYDEQR DLERSLNQVK EMQSRCNHGL RQMEEYSPFS SQSSDSSFGK
501: DGNQETSMAV QAAAASIFST CSFLLSMMKP PPTGS
Arabidopsis Description
At2g40630/T2P4.2 [Source:UniProtKB/TrEMBL;Acc:Q94EI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.