Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043415_P001 | Maize | cytosol | 6.63 | 92.5 |
| Zm00001d050601_P001 | Maize | nucleus | 33.33 | 85.71 |
| Zm00001d016658_P001 | Maize | nucleus | 32.97 | 84.79 |
| OQU84307 | Sorghum | nucleus | 84.41 | 83.66 |
| Zm00001d015148_P002 | Maize | nucleus | 83.87 | 83.57 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 69.53 | 69.04 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 69.0 | 68.63 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 69.0 | 68.63 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 68.82 | 68.33 |
| Os02t0132200-00 | Rice | plastid | 65.59 | 57.01 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 38.89 | 45.59 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 40.14 | 41.79 |
| CDX98827 | Canola | nucleus | 24.73 | 38.55 |
| CDY06973 | Canola | nucleus | 20.97 | 36.0 |
| Bra016979.1-P | Field mustard | nucleus | 19.18 | 35.55 |
| Solyc06g048970.2.1 | Tomato | nucleus | 35.66 | 35.41 |
| PGSC0003DMT400042913 | Potato | nucleus | 35.3 | 35.05 |
| CDX93166 | Canola | golgi, vacuole | 21.68 | 34.97 |
| CDY14124 | Canola | nucleus | 25.09 | 34.31 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 36.2 | 33.5 |
| Bra028765.1-P | Field mustard | nucleus | 25.45 | 32.05 |
| Bra009098.1-P | Field mustard | nucleus | 28.14 | 31.21 |
| CDX70166 | Canola | nucleus | 26.88 | 30.99 |
| Bra000196.1-P | Field mustard | nucleus | 24.19 | 30.54 |
| AT2G40630.1 | Thale cress | nucleus | 29.03 | 30.28 |
| AT5G05240.1 | Thale cress | nucleus | 28.14 | 29.62 |
| KRH04846 | Soybean | nucleus | 28.49 | 27.99 |
| KRH15893 | Soybean | nucleus | 28.49 | 27.6 |
Protein Annotations
| EnsemblPlants:Zm00001d053987_P003 | EnsemblPlants:Zm00001d053987_T003 | EnsemblPlantsGene:Zm00001d053987 | EntrezGene:100384716 | InterPro:UCP030365 | ncoils:Coil |
| PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | PIRSF:PIRSF030365 | ProteinID:AQK60922.1 | SEG:seg | UniParc:UPI000221369E |
| UniProt:K7U8U2 | MapMan:35.2 | : | : | : | : |
Description
Uncharacterised conserved protein (UCP030365)
Coordinates
chr4:-:244609336..244612754
Molecular Weight (calculated)
60739.5 Da
IEP (calculated)
6.999
GRAVY (calculated)
-0.584
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLAGPRGAT DPAGSRAAPP HEELDGRGGG ACSGAAAVEG SAWRLAVAGL GDPRAGVLES LGQPEAHLHT CTMDVPQLTA EGATQLGDRV SLLHQTGTLQ
101: SETPCLTLGR DSNAVSMEKL HASDCLPCGK ENVGTGLQPK SDPERADNRM SVARLGLDLN TVDSPDVAEP NPFFPYKKLG QSKVSDPSEC GSTTGAIEES
201: ESHRKWREMK QNGFLSSFHG NAVVPRPRGR PPKRKRDDEF KKSSSTQHVQ ANKSVKVAAP SGLLSGLNPG IINHVRNSKQ VYSIIKAMVH SERLENENHS
301: SQTGERGREV NERIQDQKYG GGFMKCHLLI NDNNAVFHQT LPNTSQFLAQ DGDSLKLQLP SAVTMSSDRT FSTSADDPAS NHDYMTVLSV KAASVASQWL
401: ELLHQDIRGR LAALKRSRKR VRNALHTELP YLTATEFSSN QENESSIANT SEIGCTDKAV SEAHVARWRS LFVQMDKTLQ EEGKQLENKL KQVQEMQLNC
501: DKGLKHMTCE APLLGPMAEL WKLKNPNISE SEWAVQAAAA SIYSTCNMVM RTENVPCF
101: SETPCLTLGR DSNAVSMEKL HASDCLPCGK ENVGTGLQPK SDPERADNRM SVARLGLDLN TVDSPDVAEP NPFFPYKKLG QSKVSDPSEC GSTTGAIEES
201: ESHRKWREMK QNGFLSSFHG NAVVPRPRGR PPKRKRDDEF KKSSSTQHVQ ANKSVKVAAP SGLLSGLNPG IINHVRNSKQ VYSIIKAMVH SERLENENHS
301: SQTGERGREV NERIQDQKYG GGFMKCHLLI NDNNAVFHQT LPNTSQFLAQ DGDSLKLQLP SAVTMSSDRT FSTSADDPAS NHDYMTVLSV KAASVASQWL
401: ELLHQDIRGR LAALKRSRKR VRNALHTELP YLTATEFSSN QENESSIANT SEIGCTDKAV SEAHVARWRS LFVQMDKTLQ EEGKQLENKL KQVQEMQLNC
501: DKGLKHMTCE APLLGPMAEL WKLKNPNISE SEWAVQAAAA SIYSTCNMVM RTENVPCF
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.