Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053987_P003 | Maize | nucleus | 83.66 | 84.41 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 70.52 | 70.64 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 69.8 | 70.05 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 69.45 | 69.57 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 68.74 | 68.98 |
| Os02t0132200-00 | Rice | plastid | 67.32 | 59.03 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 38.37 | 45.38 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 40.32 | 42.35 |
| CDX98827 | Canola | nucleus | 24.69 | 38.83 |
| Solyc06g048970.2.1 | Tomato | nucleus | 36.41 | 36.48 |
| PGSC0003DMT400042913 | Potato | nucleus | 35.88 | 35.94 |
| CDY14124 | Canola | nucleus | 25.93 | 35.78 |
| CDY06973 | Canola | nucleus | 19.89 | 34.46 |
| Bra016979.1-P | Field mustard | nucleus | 18.12 | 33.89 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 36.23 | 33.83 |
| Bra028765.1-P | Field mustard | nucleus | 26.29 | 33.41 |
| CDX93166 | Canola | golgi, vacuole | 19.54 | 31.79 |
| Bra009098.1-P | Field mustard | nucleus | 28.06 | 31.41 |
| Bra000196.1-P | Field mustard | nucleus | 24.51 | 31.22 |
| CDX70166 | Canola | nucleus | 26.82 | 31.2 |
| AT2G40630.1 | Thale cress | nucleus | 28.77 | 30.28 |
| AT5G05240.1 | Thale cress | nucleus | 28.24 | 30.0 |
| KRH04846 | Soybean | nucleus | 28.77 | 28.52 |
| KRH15893 | Soybean | nucleus | 29.13 | 28.47 |
Protein Annotations
| EnsemblPlants:OQU84307 | EnsemblPlantsGene:SORBI_3004G030700 | EntrezGene:8069930 | InterPro:UCP030365 | ncoils:Coil | PANTHER:PTHR33924 |
| PANTHER:PTHR33924:SF1 | PIRSF:PIRSF030365 | ProteinID:OQU84307 | ProteinID:OQU84307.1 | RefSeq:XP_002453261.1 | SEG:seg |
| UniParc:UPI0001A85FF0 | UniProt:A0A1Z5RKV9 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:2456787..2460296
Molecular Weight (calculated)
61390.3 Da
IEP (calculated)
7.553
GRAVY (calculated)
-0.639
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAGPRVGT DPTGSGAAPP REELDGRGRG GACSGAAAVE GSASRLAGAG LGDPRAGILE SLVQAEAYLH TYTMDVPQLT AEGATQCGDR VSLLPQTGAL
101: QSVTPCLTLG RDSNATSMEK LHGNESLPFG KENIRKDLQP KPDPEHVDNR MSVARLGLDL NTADSSDAAE LNPFFPYKKL GQLKVSGPSE CGSTTGATEE
201: SESHRKWREM KQNGFLSSSH GNAMVPRPRG RPPKRKRDDE FKKSTSTQHG QANKSMKVAA PSGLLSGLNP GIINHVRNSK QVYSIIKAMV HSERLQNENQ
301: PAFTSQTGER GRDVSERIQD QKYGSGFMKC HSLMKDNNVV FHQTLPTTLH FLPQDGDSLK LQLSSAVTMS SDRTCSTSAD DPASNHDYMT VLSVKAASVA
401: SQWLELLHQD IRGRLAALKR SRKRVRNALR TELPYLMSTE FPSNQENESS IANTSEAGCT EKAVSEAHVA RWRSLFVQMD RTLQEEGKQL ENRLKQVQEM
501: QLNCDKGLKH MTCEAPLLGP MAELWKLNNP DNSESEWAVQ AAAASIYSTC NMVMRAENNV PCF
101: QSVTPCLTLG RDSNATSMEK LHGNESLPFG KENIRKDLQP KPDPEHVDNR MSVARLGLDL NTADSSDAAE LNPFFPYKKL GQLKVSGPSE CGSTTGATEE
201: SESHRKWREM KQNGFLSSSH GNAMVPRPRG RPPKRKRDDE FKKSTSTQHG QANKSMKVAA PSGLLSGLNP GIINHVRNSK QVYSIIKAMV HSERLQNENQ
301: PAFTSQTGER GRDVSERIQD QKYGSGFMKC HSLMKDNNVV FHQTLPTTLH FLPQDGDSLK LQLSSAVTMS SDRTCSTSAD DPASNHDYMT VLSVKAASVA
401: SQWLELLHQD IRGRLAALKR SRKRVRNALR TELPYLMSTE FPSNQENESS IANTSEAGCT EKAVSEAHVA RWRSLFVQMD RTLQEEGKQL ENRLKQVQEM
501: QLNCDKGLKH MTCEAPLLGP MAELWKLNNP DNSESEWAVQ AAAASIYSTC NMVMRAENNV PCF
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.