Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G088000.1 | Wheat | nucleus | 97.15 | 97.33 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 94.66 | 94.83 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 94.13 | 94.13 |
| Zm00001d043415_P001 | Maize | cytosol | 6.05 | 85.0 |
| Zm00001d016658_P001 | Maize | nucleus | 27.94 | 72.35 |
| Zm00001d050601_P001 | Maize | nucleus | 27.94 | 72.35 |
| OQU84307 | Sorghum | nucleus | 70.64 | 70.52 |
| Zm00001d015148_P002 | Maize | nucleus | 70.11 | 70.36 |
| Zm00001d053987_P003 | Maize | nucleus | 69.04 | 69.53 |
| Os02t0132200-00 | Rice | plastid | 70.28 | 61.53 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 38.43 | 45.38 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 40.39 | 42.35 |
| CDX98827 | Canola | nucleus | 23.84 | 37.43 |
| PGSC0003DMT400042913 | Potato | nucleus | 35.77 | 35.77 |
| Solyc06g048970.2.1 | Tomato | nucleus | 35.77 | 35.77 |
| CDY14124 | Canola | nucleus | 24.56 | 33.82 |
| Bra016979.1-P | Field mustard | nucleus | 17.97 | 33.55 |
| CDY06973 | Canola | nucleus | 19.39 | 33.54 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 34.52 | 32.17 |
| CDX93166 | Canola | golgi, vacuole | 19.39 | 31.5 |
| Bra028765.1-P | Field mustard | nucleus | 24.56 | 31.15 |
| Bra000196.1-P | Field mustard | nucleus | 24.38 | 31.0 |
| AT2G40630.1 | Thale cress | nucleus | 28.65 | 30.09 |
| CDX70166 | Canola | nucleus | 25.62 | 29.75 |
| Bra009098.1-P | Field mustard | nucleus | 26.51 | 29.62 |
| KRH04846 | Soybean | nucleus | 29.18 | 28.87 |
| AT5G05240.1 | Thale cress | nucleus | 27.22 | 28.87 |
| KRH15893 | Soybean | nucleus | 29.0 | 28.3 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G095400.1 | EnsemblPlantsGene:TraesCS6A01G095400 | InterPro:UCP030365 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | PIRSF:PIRSF030365 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:61886416..61889433
Molecular Weight (calculated)
60736.0 Da
IEP (calculated)
7.519
GRAVY (calculated)
-0.583
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAGPRSAL PDPAGSGAPP PPPTAEELSR RAAGSGGGGA AEACGAAPAA QLGDPRVGIL ESSDQAQGCV HPCNKKDIPQ FSAEGATKCE YGVPSLPRTG
101: ALLQLEPACL TLGRASDAVL AGSLHDANPL ARGKENIRTD LQLKPDAKRG ENRMSDAPLG LDLNRVGSSD AAELNPFFPY KKLGQSKVSD PSECGSTTGA
201: TGESESHRKW REMKQNGFLS STHGTAVVPK PRGRPPKRKR DDELKRSTST QNEQTKFTKV AAPSGLLSGL NPGIINHVRN SKQVYSIIKA MVRSEELENA
301: SQPGLAGQTG ERGKEVIERI QDQKYGDSLM KCHLMMEGNN PMFHHGLPTA SRFLAEDGDN LKLQLSSTVT MASDRTCSTL DHESQHDYMT VLSVKAASVA
401: SQWLELLQQD IRGRLAALKR SRKRVRNALQ TELPHLISTE FSSSQENEPS IAHSSEAGPM GKTASEEHVA RWRSLFLQME RTLQEEGRHL EIRLKEVQGM
501: LQNCDKGLKQ VTCEAPLLGP MAELWKLKNP EISESEWAVQ AAAASIYSTC NLVMKTENVP CF
101: ALLQLEPACL TLGRASDAVL AGSLHDANPL ARGKENIRTD LQLKPDAKRG ENRMSDAPLG LDLNRVGSSD AAELNPFFPY KKLGQSKVSD PSECGSTTGA
201: TGESESHRKW REMKQNGFLS STHGTAVVPK PRGRPPKRKR DDELKRSTST QNEQTKFTKV AAPSGLLSGL NPGIINHVRN SKQVYSIIKA MVRSEELENA
301: SQPGLAGQTG ERGKEVIERI QDQKYGDSLM KCHLMMEGNN PMFHHGLPTA SRFLAEDGDN LKLQLSSTVT MASDRTCSTL DHESQHDYMT VLSVKAASVA
401: SQWLELLQQD IRGRLAALKR SRKRVRNALQ TELPHLISTE FSSSQENEPS IAHSSEAGPM GKTASEEHVA RWRSLFLQME RTLQEEGRHL EIRLKEVQGM
501: LQNCDKGLKQ VTCEAPLLGP MAELWKLKNP EISESEWAVQ AAAASIYSTC NLVMKTENVP CF
001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.