Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70166 | Canola | nucleus | 88.55 | 65.5 |
| CDY14124 | Canola | nucleus | 70.95 | 62.25 |
| AT5G05240.1 | Thale cress | nucleus | 68.72 | 46.42 |
| Zm00001d050601_P001 | Maize | nucleus | 24.58 | 40.55 |
| Zm00001d016658_P001 | Maize | nucleus | 23.46 | 38.71 |
| Zm00001d043415_P001 | Maize | cytosol | 3.91 | 35.0 |
| CDY06973 | Canola | nucleus | 29.33 | 32.31 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 40.22 | 30.25 |
| Solyc06g048970.2.1 | Tomato | nucleus | 46.93 | 29.89 |
| PGSC0003DMT400042913 | Potato | nucleus | 46.65 | 29.72 |
| KRH04846 | Soybean | nucleus | 45.53 | 28.7 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 48.32 | 28.69 |
| CDX93166 | Canola | golgi, vacuole | 27.09 | 28.03 |
| KRH15893 | Soybean | nucleus | 43.85 | 27.26 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 38.83 | 25.93 |
| Zm00001d015148_P002 | Maize | nucleus | 38.83 | 24.82 |
| Zm00001d053987_P003 | Maize | nucleus | 38.55 | 24.73 |
| OQU84307 | Sorghum | nucleus | 38.83 | 24.69 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 37.99 | 24.2 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 37.43 | 23.89 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 37.43 | 23.84 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 37.15 | 23.71 |
| Os02t0132200-00 | Rice | plastid | 37.71 | 21.03 |
Protein Annotations
| EnsemblPlants:CDX98827 | EnsemblPlantsGene:GSBRNA2T00106926001 | ncoils:Coil | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | PFscan:PS51257 |
| ProteinID:CDX98827 | ProteinID:CDX98827.1 | SEG:seg | UniParc:UPI0004EF380C | MapMan:35.2 | : |
Description
BnaC09g50080D
Coordinates
chrLK031907:-:183313..184724
Molecular Weight (calculated)
39745.6 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.639
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLWKAMKEN GFLSNPHGAT SSSCVVSSSH GGIPAPRKRG RKSKTNNDAA MVKKRKMEIA RKEEVDNRFA RLAAPSGLLN ELNPGIINHV RNKKQVLSII
101: QSIVKSDKDS GRNYHHHSTR LNNTTAADDV NTGGSTRSDF SQGFKYGMPE DNYYEEKCAD GEEHSKFSEN ASSLSSEDAA SLNRDSVLTV KAATVASQWL
201: ELLHQDIKCR VSALRRSKKR VRAVVTTELP FLISKEFPAD QENDPSVLVN GASRASTVDN HKNRWMALFK QLEQTLSEEE RQLESWLNKV RELQSHCDQG
301: LQHLSFSSGQ NFLQLGMPLY SRAADALISD KDLAVRAAAA SIYSTSNFLA SEENITCT
101: QSIVKSDKDS GRNYHHHSTR LNNTTAADDV NTGGSTRSDF SQGFKYGMPE DNYYEEKCAD GEEHSKFSEN ASSLSSEDAA SLNRDSVLTV KAATVASQWL
201: ELLHQDIKCR VSALRRSKKR VRAVVTTELP FLISKEFPAD QENDPSVLVN GASRASTVDN HKNRWMALFK QLEQTLSEEE RQLESWLNKV RELQSHCDQG
301: LQHLSFSSGQ NFLQLGMPLY SRAADALISD KDLAVRAAAA SIYSTSNFLA SEENITCT
001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.