Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P09810_001 | Banana | nucleus | 67.86 | 60.26 |
| Zm00001d050601_P001 | Maize | nucleus | 23.32 | 51.15 |
| Zm00001d016658_P001 | Maize | nucleus | 22.48 | 49.31 |
| CDX98827 | Canola | nucleus | 30.25 | 40.22 |
| Zm00001d015148_P002 | Maize | nucleus | 45.8 | 38.93 |
| Zm00001d053987_P003 | Maize | nucleus | 45.59 | 38.89 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 45.59 | 38.68 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 45.38 | 38.43 |
| OQU84307 | Sorghum | nucleus | 45.38 | 38.37 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 44.96 | 38.15 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 44.96 | 38.08 |
| CDY14124 | Canola | nucleus | 31.72 | 37.01 |
| PGSC0003DMT400042913 | Potato | nucleus | 43.49 | 36.83 |
| Solyc06g048970.2.1 | Tomato | nucleus | 43.07 | 36.48 |
| Zm00001d043415_P001 | Maize | cytosol | 2.94 | 35.0 |
| Os02t0132200-00 | Rice | plastid | 46.85 | 34.74 |
| Bra028765.1-P | Field mustard | nucleus | 31.51 | 33.86 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 42.86 | 33.83 |
| Bra016979.1-P | Field mustard | nucleus | 20.17 | 31.89 |
| KRH04846 | Soybean | nucleus | 38.03 | 31.87 |
| KRH15893 | Soybean | nucleus | 38.45 | 31.77 |
| Bra009098.1-P | Field mustard | nucleus | 33.4 | 31.61 |
| CDX70166 | Canola | nucleus | 31.51 | 30.99 |
| CDY06973 | Canola | nucleus | 20.8 | 30.46 |
| AT5G05240.1 | Thale cress | nucleus | 32.56 | 29.25 |
| Bra000196.1-P | Field mustard | nucleus | 26.26 | 28.28 |
| AT2G40630.1 | Thale cress | nucleus | 31.51 | 28.04 |
| CDX93166 | Canola | golgi, vacuole | 20.38 | 28.03 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P21390_001 | EnsemblPlants:GSMUA_Achr8T21390_001 | EnsemblPlantsGene:GSMUA_Achr8G21390_001 | ncoils:Coil | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 |
| SEG:seg | UniParc:UPI0002962DB0 | UniProt:M0TSE2 | MapMan:35.2 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G21390_001]
Coordinates
chr8:+:26276808..26279495
Molecular Weight (calculated)
52258.6 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.612
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKSVILDK LASETTGHSS VEDIAACLTL GPSGSASSLS LGHDGLPVSA TEFSNESCPI EAKMGSEQNG GKLVGLEVDL NSLSTEHNPF YPFKKLGQIK
101: SADASESGST TGPVEESGPL RMWKEMKQNG FLSSSHGGIP MPRQRGRQSR KRKEDELRSK TEIAKREQAN RFARIAAPSG LLSGLNPGII NHVRNSKQVH
201: SIIEAIVRSE KHDGQSQNRI TDQMGRGRKE INERRKEHIR TQDSTIKQIN VRHKFNQGAC ATSQLTTSGR GDDALTLKLS PATTMVSENA SSATTDEFSA
301: NRENPDTLSL EAANVASQWL DLLQQDIKGR LAALRRSKKR VRNVIQTELP YLLSKEFMSN QENEPYFAQS SEAGCSSKAI SDMHVARWRS LFSQMDKALF
401: EEGKHLENWL KQIQEMQLHC ENGLKFVVSG ASSHLISAND SSKPKKSEAV ERECAVWAAA ASIYSTCNLI MTTENV
101: SADASESGST TGPVEESGPL RMWKEMKQNG FLSSSHGGIP MPRQRGRQSR KRKEDELRSK TEIAKREQAN RFARIAAPSG LLSGLNPGII NHVRNSKQVH
201: SIIEAIVRSE KHDGQSQNRI TDQMGRGRKE INERRKEHIR TQDSTIKQIN VRHKFNQGAC ATSQLTTSGR GDDALTLKLS PATTMVSENA SSATTDEFSA
301: NRENPDTLSL EAANVASQWL DLLQQDIKGR LAALRRSKKR VRNVIQTELP YLLSKEFMSN QENEPYFAQS SEAGCSSKAI SDMHVARWRS LFSQMDKALF
401: EEGKHLENWL KQIQEMQLHC ENGLKFVVSG ASSHLISAND SSKPKKSEAV ERECAVWAAA ASIYSTCNLI MTTENV
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.