Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016979.1-P | Field mustard | nucleus | 65.85 | 71.1 |
| CDX93166 | Canola | golgi, vacuole | 64.62 | 60.69 |
| Zm00001d050601_P001 | Maize | nucleus | 22.15 | 33.18 |
| Zm00001d016658_P001 | Maize | nucleus | 21.54 | 32.26 |
| CDX98827 | Canola | nucleus | 32.31 | 29.33 |
| AT2G40630.1 | Thale cress | nucleus | 45.54 | 27.66 |
| Zm00001d043415_P001 | Maize | cytosol | 3.38 | 27.5 |
| CDY14124 | Canola | nucleus | 32.92 | 26.23 |
| CDX70166 | Canola | nucleus | 32.0 | 21.49 |
| Zm00001d015148_P002 | Maize | nucleus | 36.31 | 21.07 |
| Zm00001d053987_P003 | Maize | nucleus | 36.0 | 20.97 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 30.46 | 20.8 |
| OQU84307 | Sorghum | nucleus | 34.46 | 19.89 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 34.15 | 19.79 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 34.15 | 19.75 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 33.54 | 19.39 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 33.23 | 19.25 |
| Os02t0132200-00 | Rice | plastid | 35.08 | 17.76 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 28.92 | 17.54 |
Protein Annotations
| EnsemblPlants:CDY06973 | EnsemblPlantsGene:GSBRNA2T00123279001 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | ProteinID:CDY06973 | ProteinID:CDY06973.1 |
| SEG:seg | UniParc:UPI0004EE41B0 | MapMan:35.2 | : | : | : |
Description
BnaA04g23420D
Coordinates
chrLK031974:-:442567..444048
Molecular Weight (calculated)
36230.7 Da
IEP (calculated)
8.876
GRAVY (calculated)
-0.770
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSALERQES MQQWMEMKRN GYLSGPLGGP VASRPRKRKK RRGDDSSNKT NQVPNKKKDQ HVDVTAPPSG LLAGLKPGII KHVRSKEEVY SSLEALIRDS
101: AREDRGLDSK VSDHAISLTN TEQAKSVLAV EAASVASQWL EFLHQDLSER LSAVKDSRKR VDDTLKAELP LLVSSSKESS SNQENTSGDE TVTEAHRVKW
201: SAKFDEFKKR LNDEEKDFEG TLNHVKDMQS RCNEGLRQMN EASVGKYGTD QEANLAVQTA AASIFSTCRY LLSKMKSLPN TESCILHANK KELRERENAF
301: ERRPASGCAS ERVPALVTLF LVDPV
101: AREDRGLDSK VSDHAISLTN TEQAKSVLAV EAASVASQWL EFLHQDLSER LSAVKDSRKR VDDTLKAELP LLVSSSKESS SNQENTSGDE TVTEAHRVKW
201: SAKFDEFKKR LNDEEKDFEG TLNHVKDMQS RCNEGLRQMN EASVGKYGTD QEANLAVQTA AASIFSTCRY LLSKMKSLPN TESCILHANK KELRERENAF
301: ERRPASGCAS ERVPALVTLF LVDPV
001: MEEQRGISSG VVSEPASNSV ISGEKRNGNG LDEKDELGSK RVKVPDLASD AKTSSLQSHG NSNSVQQPNL SSEKLSKVSK VLVAPDAEGI RRVVRENDVL
101: SKDIKPSSTV ETRTYLPKAK SISTDDNRRV VNSGKQALLE NHTVKTDDSK CRVVKNISLL KPRETTESVV SQRGAAEPSV SVPVGDKVSP FQMCSSADGS
201: LGESDSMRRW REMKRNGFLS GPLGGVAAPT STVVTTPVEV PAPKQQKNKR RGGESLKKKN DVPKKEQQLV DRFANVTAPS GLLTELNPGI INHVRTKKQV
301: CSIIEALIRS SNDDATTRER HGDFNVRDAI REDRALAFKL PSTGVSDNAI SITNPEQATS LAVEAATVAS QWLEFLQQDL SGRLSAVQDS RNRVQNILTT
401: ELPLLASSRE SSSNQANSLE MVTTNTSGDA SSDKAATETH QKRWTAKFDQ INKALYDEQR DLERSLNQVK EMQSRCNHGL RQMEEYSPFS SQSSDSSFGK
501: DGNQETSMAV QAAAASIFST CSFLLSMMKP PPTGS
101: SKDIKPSSTV ETRTYLPKAK SISTDDNRRV VNSGKQALLE NHTVKTDDSK CRVVKNISLL KPRETTESVV SQRGAAEPSV SVPVGDKVSP FQMCSSADGS
201: LGESDSMRRW REMKRNGFLS GPLGGVAAPT STVVTTPVEV PAPKQQKNKR RGGESLKKKN DVPKKEQQLV DRFANVTAPS GLLTELNPGI INHVRTKKQV
301: CSIIEALIRS SNDDATTRER HGDFNVRDAI REDRALAFKL PSTGVSDNAI SITNPEQATS LAVEAATVAS QWLEFLQQDL SGRLSAVQDS RNRVQNILTT
401: ELPLLASSRE SSSNQANSLE MVTTNTSGDA SSDKAATETH QKRWTAKFDQ INKALYDEQR DLERSLNQVK EMQSRCNHGL RQMEEYSPFS SQSSDSSFGK
501: DGNQETSMAV QAAAASIFST CSFLLSMMKP PPTGS
Arabidopsis Description
At2g40630/T2P4.2 [Source:UniProtKB/TrEMBL;Acc:Q94EI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.