Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043415_P001 | Maize | cytosol | 18.43 | 100.0 |
| Zm00001d050601_P001 | Maize | nucleus | 92.17 | 92.17 |
| Zm00001d015148_P002 | Maize | nucleus | 91.71 | 35.54 |
| Zm00001d053987_P003 | Maize | nucleus | 84.79 | 32.97 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 73.27 | 28.29 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 72.35 | 27.99 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 72.35 | 27.94 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 71.89 | 27.81 |
| Os02t0132200-00 | Rice | plastid | 73.27 | 24.77 |
| CDX98827 | Canola | nucleus | 38.71 | 23.46 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 49.31 | 22.48 |
| Bra016979.1-P | Field mustard | nucleus | 30.41 | 21.93 |
| CDY06973 | Canola | nucleus | 32.26 | 21.54 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 50.23 | 20.34 |
| CDX93166 | Canola | golgi, vacuole | 31.34 | 19.65 |
| CDY14124 | Canola | nucleus | 35.02 | 18.63 |
| CDX70166 | Canola | nucleus | 39.17 | 17.56 |
| Bra028765.1-P | Field mustard | nucleus | 35.02 | 17.16 |
| Bra009098.1-P | Field mustard | nucleus | 39.17 | 16.9 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 46.54 | 16.75 |
| PGSC0003DMT400042913 | Potato | nucleus | 42.86 | 16.55 |
| Solyc06g048970.2.1 | Tomato | nucleus | 42.86 | 16.55 |
| AT5G05240.1 | Thale cress | nucleus | 37.79 | 15.47 |
| AT2G40630.1 | Thale cress | nucleus | 36.87 | 14.95 |
| KRH04846 | Soybean | nucleus | 38.71 | 14.79 |
| KRH15893 | Soybean | nucleus | 37.79 | 14.24 |
| Bra000196.1-P | Field mustard | nucleus | 27.19 | 13.35 |
Protein Annotations
| EnsemblPlants:Zm00001d016658_P001 | EnsemblPlants:Zm00001d016658_T001 | EnsemblPlantsGene:Zm00001d016658 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | ProteinID:AQK71375.1 |
| UniParc:UPI00084501B7 | UniProt:A0A1D6H9J2 | MapMan:35.2 | : | : | : |
Description
Uncharacterised conserved protein (UCP030365)
Coordinates
chr5:+:171575237..171576637
Molecular Weight (calculated)
24186.9 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.268
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMKDNNAVF HQALPTTSQF LAQDGDRLKL QLSSAVTMSL DRACNTSADD PTTNHDYMIV LSVKAATVAS QWLELLHQDI MGCLIALKRS RKRVRNALHT
101: ELPYLISTKF SSNQENESSI ANTCDAGCTE KAVSEAHLAR WRSLFENRLK QVQEMQSNCD KGLKHMSCEA PLLGPMAELW KLKNPDISES EWAVQAAAAS
201: IYSTCNMTMI TENVPCF
101: ELPYLISTKF SSNQENESSI ANTCDAGCTE KAVSEAHLAR WRSLFENRLK QVQEMQSNCD KGLKHMSCEA PLLGPMAELW KLKNPDISES EWAVQAAAAS
201: IYSTCNMTMI TENVPCF
001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.