Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009098.1-P | Field mustard | nucleus | 96.28 | 92.64 |
| CDX98827 | Canola | nucleus | 65.5 | 88.55 |
| CDY14124 | Canola | nucleus | 54.96 | 65.2 |
| AT5G05240.1 | Thale cress | nucleus | 58.26 | 53.21 |
| Zm00001d050601_P001 | Maize | nucleus | 18.39 | 41.01 |
| Zm00001d016658_P001 | Maize | nucleus | 17.56 | 39.17 |
| Zm00001d043415_P001 | Maize | cytosol | 2.89 | 35.0 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 40.91 | 32.84 |
| PGSC0003DMT400042913 | Potato | nucleus | 38.02 | 32.74 |
| Solyc06g048970.2.1 | Tomato | nucleus | 37.81 | 32.56 |
| CDY06973 | Canola | nucleus | 21.49 | 32.0 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 30.99 | 31.51 |
| KRH04846 | Soybean | nucleus | 36.78 | 31.34 |
| KRH15893 | Soybean | nucleus | 35.12 | 29.51 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 32.23 | 29.1 |
| CDX93166 | Canola | golgi, vacuole | 20.04 | 28.03 |
| Zm00001d053987_P003 | Maize | nucleus | 30.99 | 26.88 |
| OQU84307 | Sorghum | nucleus | 31.2 | 26.82 |
| Zm00001d015148_P002 | Maize | nucleus | 30.37 | 26.25 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 30.37 | 26.16 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 29.75 | 25.67 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 29.75 | 25.62 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 29.34 | 25.31 |
| Os02t0132200-00 | Rice | plastid | 30.58 | 23.05 |
Protein Annotations
| EnsemblPlants:CDX70166 | EnsemblPlantsGene:GSBRNA2T00136283001 | ncoils:Coil | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | ProteinID:CDX70166 |
| ProteinID:CDX70166.1 | SEG:seg | UniParc:UPI0004EF0122 | MapMan:35.2 | : | : |
Description
BnaA10g25150D
Coordinates
chrLK031790:+:3375991..3378073
Molecular Weight (calculated)
52993.8 Da
IEP (calculated)
6.667
GRAVY (calculated)
-0.594
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENDSVCGG FSLITRSDLK MGGNELDDKQ KLSQFGRVDT FRNSGNTGHA PKDTEQSQVC KVSQSFVKEG ASSEVLGQDV KPSSDKRIDV GCVAQKRSGL
101: SSVSSCLNDD LSTVCSSRRS DKPGSTDAYS ECGSSSVPVE ANDPMKLWKA MKENGFLSNP HGATSSSCVT NNDAAMVMKK RKIEIARKEE VDNRFARLAA
201: PSGLLNELNP GIINHVRNKK QVLSIIQSIV KSDKDSGRNY HHHSMRLNNT TAADDVNTGG ASRSDFSQGF KYGMPEDNYY DEKCADGEEN SKFSENASSL
301: STEDAASLNR DSVLTVKAAT VASQWLELLH QDIKCRVSAL RRSKKRVRAV VTTELPFLIS KEFPADQEND PSVLFNGASR ASTVDNHKNR WMALFKQLEQ
401: TLSEEEKQLE SWLNKVRELQ SHCDQGLQHL SLSSGQNFLQ LGMPLYSRAA DALISDKDLA VRAAAASIYS TCNFLASEEN IACT
101: SSVSSCLNDD LSTVCSSRRS DKPGSTDAYS ECGSSSVPVE ANDPMKLWKA MKENGFLSNP HGATSSSCVT NNDAAMVMKK RKIEIARKEE VDNRFARLAA
201: PSGLLNELNP GIINHVRNKK QVLSIIQSIV KSDKDSGRNY HHHSMRLNNT TAADDVNTGG ASRSDFSQGF KYGMPEDNYY DEKCADGEEN SKFSENASSL
301: STEDAASLNR DSVLTVKAAT VASQWLELLH QDIKCRVSAL RRSKKRVRAV VTTELPFLIS KEFPADQEND PSVLFNGASR ASTVDNHKNR WMALFKQLEQ
401: TLSEEEKQLE SWLNKVRELQ SHCDQGLQHL SLSSGQNFLQ LGMPLYSRAA DALISDKDLA VRAAAASIYS TCNFLASEEN IACT
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.