Factsheet for Zm00001d050601_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043415_P001	Maize	cytosol	17.51	95.0
Zm00001d016658_P001	Maize	nucleus	92.17	92.17
Zm00001d015148_P002	Maize	nucleus	93.55	36.25
Zm00001d053987_P003	Maize	nucleus	85.71	33.33
HORVU6Hr1G017100.1	Barley	cytosol	73.27	28.29
TraesCS6D01G088000.1	Wheat	nucleus	72.35	27.99
TraesCS6A01G095400.1	Wheat	nucleus	72.35	27.94
TraesCS6B01G123400.1	Wheat	nucleus	71.89	27.81
Os02t0132200-00	Rice	plastid	75.58	25.55
CDX98827	Canola	nucleus	40.55	24.58
GSMUA_Achr8P21390_001	Banana	nucleus	51.15	23.32
Bra016979.1-P	Field mustard	nucleus	30.88	22.26
CDY06973	Canola	nucleus	33.18	22.15
GSMUA_Achr3P09810_001	Banana	nucleus	52.53	21.27
CDX93166	Canola	golgi, vacuole	31.8	19.94
CDY14124	Canola	nucleus	36.87	19.61
CDX70166	Canola	nucleus	41.01	18.39
Bra028765.1-P	Field mustard	nucleus	36.87	18.06
Bra009098.1-P	Field mustard	nucleus	41.01	17.69
VIT_13s0067g03020.t01	Wine grape	nucleus	48.39	17.41
PGSC0003DMT400042913	Potato	nucleus	44.7	17.26
Solyc06g048970.2.1	Tomato	nucleus	44.7	17.26
AT5G05240.1	Thale cress	nucleus	39.63	16.23
AT2G40630.1	Thale cress	nucleus	38.25	15.51
KRH04846	Soybean	nucleus	39.63	15.14
KRH15893	Soybean	nucleus	38.71	14.58
Bra000196.1-P	Field mustard	nucleus	29.03	14.25

Protein Annotations

EnsemblPlants:Zm00001d050601_P001	EnsemblPlants:Zm00001d050601_T001	EnsemblPlantsGene:Zm00001d050601	PANTHER:PTHR33924	PANTHER:PTHR33924:SF1	ProteinID:AQK52769.1
UniParc:UPI000844B01B	UniProt:A0A1D6Q2F4	MapMan:35.2	:	:	:

Description

Uncharacterised conserved protein (UCP030365)

Coordinates

chr4:-:103262491..103263890

Molecular Weight (calculated)

24155.6 Da

IEP (calculated)

6.862

GRAVY (calculated)

-0.434

Length

217 amino acids

Sequence
(BLAST)

001: MLMKDNNAVF HQALPTTSQF LAQDGDRLKL QLSSAVTMSS DRACSTSADD PATNHDYMTV LSLKAATVAS QWLELLHQDI RGRHAALKRS RKRVRNALHT
101: ELPYLISTEF ASNQENESSI TNTCDAGCTE KAVPEAHLAR WRSLFENRLK QVQEMQSNCD KGLKHMSSEA PLLGPVAELW KLKNPDISES EWAVQAAAAS
201: IYSTCNMAMR TENVPCF

Best Arabidopsis Sequence Match ( AT5G05240.2 )
(BLAST)

001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S

Arabidopsis Description

Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.