Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016658_P001 | Maize | nucleus | 100.0 | 18.43 |
| Zm00001d050601_P001 | Maize | nucleus | 95.0 | 17.51 |
| Zm00001d015148_P002 | Maize | nucleus | 95.0 | 6.79 |
| Zm00001d053987_P003 | Maize | nucleus | 92.5 | 6.63 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 85.0 | 6.06 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 85.0 | 6.05 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 85.0 | 6.05 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 82.5 | 5.88 |
| Os02t0132200-00 | Rice | plastid | 75.0 | 4.67 |
| CDX98827 | Canola | nucleus | 35.0 | 3.91 |
| CDY06973 | Canola | nucleus | 27.5 | 3.38 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 40.0 | 2.99 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 35.0 | 2.94 |
| CDX70166 | Canola | nucleus | 35.0 | 2.89 |
| CDX93166 | Canola | golgi, vacuole | 25.0 | 2.89 |
| Bra009098.1-P | Field mustard | nucleus | 35.0 | 2.78 |
| Bra000196.1-P | Field mustard | nucleus | 30.0 | 2.71 |
| CDY14124 | Canola | nucleus | 27.5 | 2.7 |
| Bra016979.1-P | Field mustard | nucleus | 20.0 | 2.66 |
| AT5G05240.1 | Thale cress | nucleus | 35.0 | 2.64 |
| Solyc06g048970.2.1 | Tomato | nucleus | 35.0 | 2.49 |
| PGSC0003DMT400042913 | Potato | nucleus | 35.0 | 2.49 |
| Bra028765.1-P | Field mustard | nucleus | 27.5 | 2.48 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 32.5 | 2.16 |
| KRH04846 | Soybean | nucleus | 30.0 | 2.11 |
| KRH15893 | Soybean | nucleus | 30.0 | 2.08 |
| AT2G40630.1 | Thale cress | nucleus | 27.5 | 2.06 |
Protein Annotations
| EnsemblPlants:Zm00001d043415_P001 | EnsemblPlants:Zm00001d043415_T001 | EnsemblPlantsGene:Zm00001d043415 | ProteinID:ONM37789.1 | UniParc:UPI0008457407 | UniProt:A0A1D6NB73 |
| MapMan:35.2 | : | : | : | : | : |
Description
Uncharacterised conserved protein (UCP030365)
Coordinates
chr3:-:199055900..199056426
Molecular Weight (calculated)
4488.4 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.427
Length
40 amino acids
Sequence
(BLAST)
(BLAST)
1: MQSNCDKGLK HMSCEAPLLG PMAELWKLKN PDISESEWAV
1: MEIMLVTMYS GSIKTFECTI SVLGPRINLI EHKNPGISEK RGITLSSEFK KLDTHQLENV AKGKACERKK LRELISSKSR K
Arabidopsis Description
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.