Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P21390_001 | Banana | nucleus | 60.26 | 67.86 |
| Zm00001d050601_P001 | Maize | nucleus | 21.27 | 52.53 |
| Zm00001d016658_P001 | Maize | nucleus | 20.34 | 50.23 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 42.54 | 40.57 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 42.35 | 40.39 |
| OQU84307 | Sorghum | nucleus | 42.35 | 40.32 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 42.16 | 40.29 |
| Zm00001d053987_P003 | Maize | nucleus | 41.79 | 40.14 |
| Zm00001d043415_P001 | Maize | cytosol | 2.99 | 40.0 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 41.6 | 39.75 |
| Zm00001d015148_P002 | Maize | nucleus | 41.42 | 39.64 |
| CDX98827 | Canola | nucleus | 25.93 | 38.83 |
| PGSC0003DMT400042913 | Potato | nucleus | 40.49 | 38.61 |
| Solyc06g048970.2.1 | Tomato | nucleus | 40.11 | 38.26 |
| Os02t0132200-00 | Rice | plastid | 44.22 | 36.92 |
| CDY14124 | Canola | nucleus | 27.24 | 35.78 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 38.43 | 34.16 |
| KRH04846 | Soybean | nucleus | 34.89 | 32.92 |
| Bra028765.1-P | Field mustard | nucleus | 26.68 | 32.28 |
| CDX70166 | Canola | nucleus | 29.1 | 32.23 |
| Bra009098.1-P | Field mustard | nucleus | 29.85 | 31.81 |
| KRH15893 | Soybean | nucleus | 34.14 | 31.77 |
| Bra016979.1-P | Field mustard | nucleus | 16.98 | 30.23 |
| CDY06973 | Canola | nucleus | 17.54 | 28.92 |
| AT5G05240.1 | Thale cress | nucleus | 28.54 | 28.87 |
| Bra000196.1-P | Field mustard | nucleus | 23.69 | 28.73 |
| AT2G40630.1 | Thale cress | nucleus | 27.61 | 27.66 |
| CDX93166 | Canola | golgi, vacuole | 16.98 | 26.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P09810_001 | EnsemblPlants:GSMUA_Achr3T09810_001 | EnsemblPlantsGene:GSMUA_Achr3G09810_001 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | UniParc:UPI000296EDF9 |
| UniProt:M0SD98 | MapMan:35.2 | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G09810_001]
Coordinates
chr3:-:7126858..7129695
Molecular Weight (calculated)
59653.2 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.615
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MICVLGIRSC SLDSSTTNEL KVPGHDHKEE RHSEILVATT SVLSDTLASE TTCHSSVEHV PACLTLGPAG STNPFILGHE NVPISAKEIS RQSFPIEKNE
101: GEQGSTKMTG LTVDLNSIAT SSTAEHDFFY PYKKLGQIKP ADASESGSTT GPVEESEPLR VWKEMKQNGF LSSSRGSILM PKQQVRQPRK RKYDELKRKT
201: EFAKREQVNR FNKIAAPCGL LSGLNPGIIN HVRNSKQVHS IIDAIVHSEK RDNQTQNRIT DQAERGIKET SDRRKEHICS QDSTTKQVIL SEPCIPPRTE
301: YPGENEIEMV WHTFHQGACA TSQLTTECEG DALKLKVSSA TARTSENVSS ATIDEFSANQ ENVDSLSLKA ANVASQWLDL LQQDIKGRIA ALRRSKKRVR
401: NVIQTELPYL LSKEFTSNQE NEPNFAQSSE AGSTKAISEM HVVRWRSLFS QMDKTLYEEG KHLESWLKQV QEMQLHCENG LKFVSSGASS HLNLTHDSSK
501: LKKSESTERE YAVRAAAASI YSTCNLIMTR GNVQCF
101: GEQGSTKMTG LTVDLNSIAT SSTAEHDFFY PYKKLGQIKP ADASESGSTT GPVEESEPLR VWKEMKQNGF LSSSRGSILM PKQQVRQPRK RKYDELKRKT
201: EFAKREQVNR FNKIAAPCGL LSGLNPGIIN HVRNSKQVHS IIDAIVHSEK RDNQTQNRIT DQAERGIKET SDRRKEHICS QDSTTKQVIL SEPCIPPRTE
301: YPGENEIEMV WHTFHQGACA TSQLTTECEG DALKLKVSSA TARTSENVSS ATIDEFSANQ ENVDSLSLKA ANVASQWLDL LQQDIKGRIA ALRRSKKRVR
401: NVIQTELPYL LSKEFTSNQE NEPNFAQSSE AGSTKAISEM HVVRWRSLFS QMDKTLYEEG KHLESWLKQV QEMQLHCENG LKFVSSGASS HLNLTHDSSK
501: LKKSESTERE YAVRAAAASI YSTCNLIMTR GNVQCF
001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.