Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043415_P001 | Maize | cytosol | 6.79 | 95.0 |
| Zm00001d050601_P001 | Maize | nucleus | 36.25 | 93.55 |
| Zm00001d016658_P001 | Maize | nucleus | 35.54 | 91.71 |
| Zm00001d053987_P003 | Maize | nucleus | 83.57 | 83.87 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 70.36 | 70.11 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 69.82 | 69.7 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 69.46 | 69.22 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 69.11 | 68.98 |
| Os02t0132200-00 | Rice | plastid | 66.96 | 58.41 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 38.93 | 45.8 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 39.64 | 41.42 |
| CDX98827 | Canola | nucleus | 24.82 | 38.83 |
| CDY06973 | Canola | nucleus | 21.07 | 36.31 |
| Bra016979.1-P | Field mustard | nucleus | 19.46 | 36.21 |
| CDY14124 | Canola | nucleus | 25.54 | 35.05 |
| Solyc06g048970.2.1 | Tomato | nucleus | 34.64 | 34.52 |
| CDX93166 | Canola | golgi, vacuole | 21.07 | 34.1 |
| PGSC0003DMT400042913 | Potato | nucleus | 34.11 | 33.99 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 36.07 | 33.5 |
| Bra028765.1-P | Field mustard | nucleus | 26.07 | 32.96 |
| Bra009098.1-P | Field mustard | nucleus | 27.68 | 30.82 |
| Bra000196.1-P | Field mustard | nucleus | 24.29 | 30.77 |
| CDX70166 | Canola | nucleus | 26.25 | 30.37 |
| AT5G05240.1 | Thale cress | nucleus | 28.39 | 30.0 |
| AT2G40630.1 | Thale cress | nucleus | 28.57 | 29.91 |
| KRH04846 | Soybean | nucleus | 28.39 | 27.99 |
| KRH15893 | Soybean | nucleus | 28.57 | 27.78 |
Protein Annotations
| EMBL:BT043104 | EnsemblPlants:Zm00001d015148_P002 | EnsemblPlants:Zm00001d015148_T002 | EnsemblPlantsGene:Zm00001d015148 | EntrezGene:100274461 | InterPro:UCP030365 |
| ncoils:Coil | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | PIRSF:PIRSF030365 | ProteinID:AQK68164.1 | SEG:seg |
| UniParc:UPI00017B7E33 | UniProt:B4G166 | MapMan:35.2 | : | : | : |
Description
Uncharacterised conserved protein (UCP030365)
Coordinates
chr5:-:76961130..76964643
Molecular Weight (calculated)
60560.3 Da
IEP (calculated)
7.650
GRAVY (calculated)
-0.581
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAGPRVAT DPAGSGAAPP REELDRRGGA CSGAAAAEGS ASRLAGAGLG DPRAGILESS GQAEAYLHTC TMDVSQLTAE GVTQCGARVS LLPQIGALQS
101: ETPCLTLGRD SSAESMEKLH GSESLPCCKE NIGTVRQPKP DPEHVDNRMS VARLGLDLNT VDSSDAAELN PFFPYKKLGQ SKVSDPSECG STTAATAESE
201: SHRKWREMKR NGFLSSSHGN AVVPRPRGRP PKRKKDDEFK RSTSTQHGQA NKSVKVAAPS GLLSGLNPGI INHVRNSKQV YSIIKAMVHS ERLENEKQPA
301: FTSQTGGRGR EASEGIQDEK YGAGFKKCHM LMKDNNAVFH QALPTTSQFL AQDGDRLKLQ LSSAVTMSSD RACSTSADDP ATNHDYMTVL SVKAASVASQ
401: WLELLHQDIR GRLAALKRSR KRVRNALHTE LPYLISTEFS SNQENESSIA NTCDAGCTEK AVSEAHVARW RSLFVQMDRA LQEEGKQLEN RLKQVQEMQS
501: NCDKGLKHMS CEAPLLGPIP ELWKLKNPDI SESEWAVQAA AASIYSTCNM AMRTENVPCF
101: ETPCLTLGRD SSAESMEKLH GSESLPCCKE NIGTVRQPKP DPEHVDNRMS VARLGLDLNT VDSSDAAELN PFFPYKKLGQ SKVSDPSECG STTAATAESE
201: SHRKWREMKR NGFLSSSHGN AVVPRPRGRP PKRKKDDEFK RSTSTQHGQA NKSVKVAAPS GLLSGLNPGI INHVRNSKQV YSIIKAMVHS ERLENEKQPA
301: FTSQTGGRGR EASEGIQDEK YGAGFKKCHM LMKDNNAVFH QALPTTSQFL AQDGDRLKLQ LSSAVTMSSD RACSTSADDP ATNHDYMTVL SVKAASVASQ
401: WLELLHQDIR GRLAALKRSR KRVRNALHTE LPYLISTEFS SNQENESSIA NTCDAGCTEK AVSEAHVARW RSLFVQMDRA LQEEGKQLEN RLKQVQEMQS
501: NCDKGLKHMS CEAPLLGPIP ELWKLKNPDI SESEWAVQAA AASIYSTCNM AMRTENVPCF
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.