Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042913 | Potato | nucleus | 97.15 | 97.15 |
| CDX98827 | Canola | nucleus | 29.89 | 46.93 |
| Zm00001d050601_P001 | Maize | nucleus | 17.26 | 44.7 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 47.51 | 44.28 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 36.48 | 43.07 |
| Zm00001d016658_P001 | Maize | nucleus | 16.55 | 42.86 |
| CDY14124 | Canola | nucleus | 30.96 | 42.65 |
| Bra028765.1-P | Field mustard | nucleus | 32.38 | 41.08 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 38.26 | 40.11 |
| KRH04846 | Soybean | nucleus | 39.5 | 39.08 |
| CDX70166 | Canola | nucleus | 32.56 | 37.81 |
| KRH15893 | Soybean | nucleus | 38.61 | 37.67 |
| Bra009098.1-P | Field mustard | nucleus | 33.63 | 37.57 |
| OQU84307 | Sorghum | nucleus | 36.48 | 36.41 |
| AT5G05240.1 | Thale cress | nucleus | 33.81 | 35.85 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 35.77 | 35.83 |
| TraesCS6A01G095400.1 | Wheat | nucleus | 35.77 | 35.77 |
| Zm00001d053987_P003 | Maize | nucleus | 35.41 | 35.66 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 35.41 | 35.47 |
| HORVU6Hr1G017100.1 | Barley | cytosol | 35.23 | 35.23 |
| Zm00001d043415_P001 | Maize | cytosol | 2.49 | 35.0 |
| Zm00001d015148_P002 | Maize | nucleus | 34.52 | 34.64 |
| Os02t0132200-00 | Rice | plastid | 34.7 | 30.37 |
Protein Annotations
| EnsemblPlants:Solyc06g048970.2.1 | EnsemblPlantsGene:Solyc06g048970.2 | ncoils:Coil | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | SEG:seg |
| UniParc:UPI0002766749 | UniProt:K4C5E3 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6:-:32120017..32124129
Molecular Weight (calculated)
61321.1 Da
IEP (calculated)
7.564
GRAVY (calculated)
-0.614
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDCGVPDQ SIGITGSGTG TKVIAGEKRG RVGVEERPGL CHKRVKMRDL ESVLRTEEKT EMGTGNLVTD PTLRLIDLNA NVVASSNVIA SHVEETNKLA
101: SLGKKDNGQE GDPMKSKRFA LDLNAEDVSS SINHESSYPC KNSVYLKSKD DFECASSVGP LDENESMRIW NEMKQNGFLS HSHGGAPMPK QQGRKSKSDG
201: MKKKLELAKK ERVDRFAKIA APSGLLNGLN PGIINHVRNS KQVHSIIEAL VKSEKRENAH GRSKVPSIQT KGGLKDHSER NKDQENIDGP GVSRFNPALE
301: DLPGSRCRNG YLTSLNKSIS LNSVFTGGDG GACMVDTRVT GKMVYHPNPN IGTENDALAL KLSSSTTIAS DNTSSLSNEE SANLASVNSL SIKAASVASQ
401: WLELLHQDIK GRLAALRRSK KRVRAVIQTE FPCLFSREFS SNQENSSYGT QSSSVGHFDN ATAHAHHARW TALFDQMDGA LSDEERQLES WLNQVRQMQL
501: QCEQGLQKFG APHNLHQLGL LQNDCRLEKA ESSETDLAVR AAAASIYSTC NFLSSMENLP CC
101: SLGKKDNGQE GDPMKSKRFA LDLNAEDVSS SINHESSYPC KNSVYLKSKD DFECASSVGP LDENESMRIW NEMKQNGFLS HSHGGAPMPK QQGRKSKSDG
201: MKKKLELAKK ERVDRFAKIA APSGLLNGLN PGIINHVRNS KQVHSIIEAL VKSEKRENAH GRSKVPSIQT KGGLKDHSER NKDQENIDGP GVSRFNPALE
301: DLPGSRCRNG YLTSLNKSIS LNSVFTGGDG GACMVDTRVT GKMVYHPNPN IGTENDALAL KLSSSTTIAS DNTSSLSNEE SANLASVNSL SIKAASVASQ
401: WLELLHQDIK GRLAALRRSK KRVRAVIQTE FPCLFSREFS SNQENSSYGT QSSSVGHFDN ATAHAHHARW TALFDQMDGA LSDEERQLES WLNQVRQMQL
501: QCEQGLQKFG APHNLHQLGL LQNDCRLEKA ESSETDLAVR AAAASIYSTC NFLSSMENLP CC
001: MSQVGKVSES FVTEGKNIKT ELLVGQEVKS SSSKLVLNTD VDCDKRALLK RCDNADAVSS CLNDDLTSVC SSRISQKTSS MDVYSECGSS NGSVAKRDPM
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
101: KVWTEMKQNG YLSNPNGGIS TTSSSCLISS SHGGIPAPKK RGRKTKINND AAVAKKRKIE RKEEVDRFAR LAAPSGLLNE LNPGIINHVR NKKQVLSIIE
201: NIVKSERDAG NYHSTLRHSN SADGSPRKNL GDACRSEFYQ VFQYALPKDM YSMRYYAEKC ADDEFSEENN TVRSRFQVAG KFSENDSSLS SEDASDLNSA
301: SVLTVNAATV ASQWLELLHQ DIKGRVSALR RSRKRVRAVV TIELPHLIRK EFPADQENDP TLLLGGASKA STVDIHKSRW MTLFKQLEHK LSEEESQLES
401: WLNQVRYMQS HCDEGLQHLS LSSGQNFLQL GMPLDSRAAN ALISDKDLVI KAAAASIYST CSFLEENITC S
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.