Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G095400.1 | Wheat | nucleus | 94.13 | 94.13 |
| TraesCS6D01G088000.1 | Wheat | nucleus | 92.7 | 92.87 |
| TraesCS6B01G123400.1 | Wheat | nucleus | 91.99 | 92.16 |
| Zm00001d043415_P001 | Maize | cytosol | 6.05 | 85.0 |
| Zm00001d050601_P001 | Maize | nucleus | 28.29 | 73.27 |
| Zm00001d016658_P001 | Maize | nucleus | 28.29 | 73.27 |
| Zm00001d015148_P002 | Maize | nucleus | 69.22 | 69.46 |
| OQU84307 | Sorghum | nucleus | 69.57 | 69.45 |
| Zm00001d053987_P003 | Maize | nucleus | 68.33 | 68.82 |
| Os02t0132200-00 | Rice | plastid | 69.22 | 60.59 |
| GSMUA_Achr8P21390_001 | Banana | nucleus | 38.08 | 44.96 |
| GSMUA_Achr3P09810_001 | Banana | nucleus | 40.57 | 42.54 |
| CDX98827 | Canola | nucleus | 24.2 | 37.99 |
| PGSC0003DMT400042913 | Potato | nucleus | 35.23 | 35.23 |
| Solyc06g048970.2.1 | Tomato | nucleus | 35.23 | 35.23 |
| CDY06973 | Canola | nucleus | 19.75 | 34.15 |
| CDY14124 | Canola | nucleus | 24.73 | 34.07 |
| Bra016979.1-P | Field mustard | nucleus | 18.15 | 33.89 |
| VIT_13s0067g03020.t01 | Wine grape | nucleus | 35.05 | 32.67 |
| CDX93166 | Canola | golgi, vacuole | 19.39 | 31.5 |
| Bra028765.1-P | Field mustard | nucleus | 24.38 | 30.93 |
| Bra000196.1-P | Field mustard | nucleus | 24.02 | 30.54 |
| Bra009098.1-P | Field mustard | nucleus | 27.22 | 30.42 |
| CDX70166 | Canola | nucleus | 26.16 | 30.37 |
| AT2G40630.1 | Thale cress | nucleus | 28.47 | 29.91 |
| KRH04846 | Soybean | nucleus | 29.54 | 29.23 |
| AT5G05240.1 | Thale cress | nucleus | 27.4 | 29.06 |
| KRH15893 | Soybean | nucleus | 29.54 | 28.82 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G017100.1 | EnsemblPlantsGene:HORVU6Hr1G017100 | InterPro:UCP030365 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF1 | PIRSF:PIRSF030365 |
| SEG:seg | UniParc:UPI000B46172E | UniProt:A0A287TFP4 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:39761654..39764792
Molecular Weight (calculated)
60206.1 Da
IEP (calculated)
7.205
GRAVY (calculated)
-0.586
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAGPRSAL PDPAGSGAPP TTTTPEELHA RAAGSGGGGA AEACGSAPXX XXXXPRVGIL ESSEQSQGCV HPCNKKDVAQ FSAEGATKCE YGVPSLPRTG
101: ALLQLEPACL TLGRASDAVL AESLHDANPL ARGKENIRTD LQPKCDAKHG ENRMSDAPLG LDLNRVGSSD AAEVNPFFPY KKLGQSKVSD PSECGSTTGA
201: TGESESHRKW REMKQNGFLS STHGTAVAPK PRGRPPKRKR DDELKRNTST QNEQIKFTKV AAPSGLLSGL NPGIINHVRN SKQVYSIIKA MVRSEELENT
301: NQPGLAGQTG ERGKEVIDRI QDQKYGDSLM KCHLMMEGNN AMFHHGLPTA SKFLAEDGDN LKLQLSSTVT MASDRTCSTL DHESQHDYMT VLSVKAASVA
401: SQWLELLQQD IRGRLAALKR SRKRVRNALQ TELPHLISTE FSSSQENEPS IAHSSEAGPT GKTVSEEHVA RWRSLFLQME RTLQEEGRHL EIRLKEVQGM
501: LQNCDKGLKQ VTCEAPLLGP MAELWKLKNP EISESEWAVQ AAAASIYSTC NLVMKTENVS CF
101: ALLQLEPACL TLGRASDAVL AESLHDANPL ARGKENIRTD LQPKCDAKHG ENRMSDAPLG LDLNRVGSSD AAEVNPFFPY KKLGQSKVSD PSECGSTTGA
201: TGESESHRKW REMKQNGFLS STHGTAVAPK PRGRPPKRKR DDELKRNTST QNEQIKFTKV AAPSGLLSGL NPGIINHVRN SKQVYSIIKA MVRSEELENT
301: NQPGLAGQTG ERGKEVIDRI QDQKYGDSLM KCHLMMEGNN AMFHHGLPTA SKFLAEDGDN LKLQLSSTVT MASDRTCSTL DHESQHDYMT VLSVKAASVA
401: SQWLELLQQD IRGRLAALKR SRKRVRNALQ TELPHLISTE FSSSQENEPS IAHSSEAGPT GKTVSEEHVA RWRSLFLQME RTLQEEGRHL EIRLKEVQGM
501: LQNCDKGLKQ VTCEAPLLGP MAELWKLKNP EISESEWAVQ AAAASIYSTC NLVMKTENVS CF
001: MEEHDAVSGG CSPIPRSDLK IGGNELDERQ ELSKIEPVTP TLNSGNTVHG SKDVEKANGM SQVGKVSESF VTEGKNIKTE LLVGQEVKSS SSKLVLNTDV
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
101: DCDKRALLKR CDNADAVSSC LNDDLTSVCS SRISQKTSSM DVYSECGSSN GSVAKRDPMK VWTEMKQNGY LSNPNGGIST TSSSCLISSS HGGIPAPKKR
201: GRKTKINNDA AVAKKRKIER KEEVDRFARL AAPSGLLNEL NPGIINHVRN KKQVLSIIEN IVKSERDAGN YHSTLRHSNS ADGSPRKNLG DACRSEFYQV
301: FQYALPKDMY SMRYYAEKCA DDEFSEENNT VRSRFQVAGK FSENDSSLSS EDASDLNSAS VLTVNAATVA SQWLELLHQD IKGRVSALRR SRKRVRAVVT
401: IELPHLIRKE FPADQENDPT LLLGGASKAS TVDIHKSRWM TLFKQLEHKL SEEESQLESW LNQVRYMQSH CDEGLQHLSL SSGQNFLQLG MPLDSRAANA
501: LISDKDLVIK AAAASIYSTC SFLEENITCS
Arabidopsis Description
Uncharacterised conserved protein (UCP030365) [Source:TAIR;Acc:AT5G05240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.