Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010280.1-P | Field mustard | plastid | 97.8 | 97.27 |
| CDY55614 | Canola | plastid | 86.81 | 91.33 |
| AT4G30620.1 | Thale cress | plastid | 86.26 | 87.22 |
| CDX76844 | Canola | plastid | 78.02 | 77.6 |
| CDY34804 | Canola | plastid | 78.02 | 77.6 |
| Solyc12g009980.1.1 | Tomato | plastid | 67.03 | 66.3 |
| PGSC0003DMT400020463 | Potato | mitochondrion | 66.48 | 65.76 |
| VIT_11s0037g00330.t01 | Wine grape | plastid | 67.03 | 62.24 |
| EES04638 | Sorghum | plastid | 62.64 | 61.62 |
| KRH55034 | Soybean | plastid | 65.93 | 61.54 |
| KRH26162 | Soybean | plastid | 65.38 | 60.71 |
| Os02t0180200-01 | Rice | plasma membrane, plastid | 61.54 | 60.54 |
| GSMUA_Achr4P20470_001 | Banana | plastid | 63.74 | 60.42 |
| TraesCS6A01G147700.1 | Wheat | plastid | 61.54 | 59.57 |
| TraesCS6D01G137000.1 | Wheat | plastid | 61.54 | 59.57 |
| TraesCS6B01G175800.1 | Wheat | plastid | 60.99 | 59.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 69.23 | 55.26 |
| Zm00001d053743_P002 | Maize | plastid | 63.74 | 52.49 |
| Zm00001d015505_P001 | Maize | plastid | 61.54 | 37.84 |
| CDY45942 | Canola | nucleus | 42.31 | 29.5 |
| CDY20394 | Canola | nucleus | 41.76 | 28.9 |
Protein Annotations
| EnsemblPlants:CDY23248 | EnsemblPlantsGene:GSBRNA2T00021807001 | Gene3D:3.30.1310.10 | InterPro:IPR036894 | InterPro:YbaB-like_sf | InterPro:YbaB/EbfC |
| PANTHER:PTHR33449 | PANTHER:PTHR33449:SF3 | PFAM:PF02575 | ProteinID:CDY23248 | ProteinID:CDY23248.1 | SEG:seg |
| SUPFAM:SSF82607 | UniParc:UPI0004EDAE09 | UniProt:A0A078GF50 | MapMan:23.1.7.2 | : | : |
Description
BnaA08g12980DBnaA08g12980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF50]
Coordinates
chrLK032142:-:68097..69885
Molecular Weight (calculated)
19797.6 Da
IEP (calculated)
9.460
GRAVY (calculated)
-0.482
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTATTTDF FKPFLSPFPN GNKAAQQRGS RQNNVVWLNR KSTNRSLRVN GLFGGGKKEN NDDNGQSKAG ILGNMQNLYE TVKKAQMVVQ VEAVRVQKEL
101: AVAEFDGYCE GELVKVTLSG NQQPIRTDIT DAAMELGSEK LSLLVTEAYK DAHAKSVLAM KERMSDLAQS LGMPPGLSDG LK
101: AVAEFDGYCE GELVKVTLSG NQQPIRTDIT DAAMELGSEK LSLLVTEAYK DAHAKSVLAM KERMSDLAQS LGMPPGLSDG LK
001: MASTATNTDF FKTLLSPFSN GNAAQRSSRQ NIVWLNRKQS GNNNRSLRVN GLFGGGKKDN KEDGQSKAGI LGNMQNLYET VKKAQMVVQV EAVRVQKELA
101: VAEFDGYCQG ELVKVTLSGN QQPIRTDITD AAMELGSEKL SLLVTEAYKD AHSKSVLAMK ERMSDLAQSL GMPPGLDGLK
101: VAEFDGYCQG ELVKVTLSGN QQPIRTDITD AAMELGSEKL SLLVTEAYKD AHSKSVLAMK ERMSDLAQSL GMPPGLDGLK
Arabidopsis Description
Nucleoid-associated protein At4g30620, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M098]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.