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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 1
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:endoplasmic reticulum, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:endoplasmic reticulum
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr4P11710_001
GSMUA_Achr4P11720_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G50575.1 GSMUA_Achr4P11710_001 AT3G19895.1 21798944
AT1G50575.1 GSMUA_Achr4P11720_001 AT3G19895.1 21798944
AT1G50575.1 GSMUA_Achr10P... AT4G25200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0090g01580.t01 Wine grape plastid 56.43 58.06
KRH46290 Soybean cytosol 54.23 56.72
Solyc07g065180.2.1 Tomato cytosol, plastid 53.6 56.62
PGSC0003DMT400057413 Potato plastid 54.23 56.35
HORVU7Hr1G085160.2 Barley plastid, vacuole 56.43 55.38
Bra018858.1-P Field mustard plastid 51.72 55.0
CDY37126 Canola plastid 51.41 54.67
TraesCS7B01G258700.1 Wheat plastid 56.74 54.52
TraesCS7D01G353500.1 Wheat plastid 56.43 54.38
CDY22805 Canola plastid 51.1 54.33
Zm00001d033111_P003 Maize cytosol 52.98 53.82
EER93868 Sorghum cytosol 55.17 53.5
AT1G50575.1 Thale cress plastid 50.47 52.61
Os03t0587100-04 Rice plastid 54.86 52.24
KRG98613 Soybean plastid 42.32 51.33
TraesCS7A01G369800.1 Wheat cytosol, mitochondrion, nucleus 56.74 50.28
Protein Annotations
EnsemblPlants:GSMUA_Achr4P33110_001EnsemblPlants:GSMUA_Achr4T33110_001EnsemblPlantsGene:GSMUA_Achr4G33110_001Gene3D:3.40.50.450InterPro:LOG_famPANTHER:PTHR31208
PANTHER:PTHR31208:SF1PFAM:PF03641SUPFAM:SSF102405UniParc:UPI000296907AUniProt:M0SU73MapMan:35.2
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G33110_001]
Coordinates
chr4:-:29619973..29622644
Molecular Weight (calculated)
34822.8 Da
IEP (calculated)
9.285
GRAVY (calculated)
-0.194
Length
319 amino acids
Sequence
(BLAST)
001: MVAHVLPRGS LLLARPTSRR RGSHVTGTAP PVVGRGQRTG CRPSGLTVPR QGRVSALALQ SDGLLLSERT SPEEVKREIQ RCYGLVHKLG RGVVYLGSSR
101: VQVGHPHYEQ AKQLAREASY FSSSRYIHVA LLLDCTTWTG AGPGLMDAAF KGALEAKKPV GGFKIARESG EWTSSNFHPY LPPETYLTCR FFSARKHGLV
201: DAAVRNNPSD MTAVVALPGG IGTLDEVFEI LALIQLERIG SKFPVPFLLM NYDSFYSKLL DFLDDSGKWG TVARGEVEAL WKVCGGNSEA SDYLAEFYGL
301: PQTKMNNNKI SVEGSGFME
Best Arabidopsis Sequence Match ( AT1G50575.1 )
(BLAST)
001: MGVSMLDSSW SFRLSSKMSP SPTQKLASSL TERDPISLNL RFDHSIRAYS ARALKCRSVK SEDFVERSSP FEVKKELEIC FDLVHRLGRG IVYLGSARIP
101: PNHSHYLQAQ ELSREAATLL DCTTWSGAGP GLMDAVTEGA LEAEKPVGGI KIEKEAGEWT ASKFHPYLPP QNYHTCRFFS ARKHGLVDAV IRNNVSEKTA
201: IIALPGGIGT LDEMFEILAL IQLERIGSAL PVPFIVMNYD AFYSKLLEFI ETCENLGTVS KGEVSALWKV CNNNFEALTY LAEFYDLPDG SAKLETELRK
301: TTPTRG
Arabidopsis Description
Putative lysine decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q93XW9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.